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2025-01-20gnu: python-osqp: Add missing inputs.Ricardo Wurmus
* gnu/packages/python-science.scm (python-osqp)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: Ief43d97442a98935dea1499c67e022e9beb5359e
2025-01-20gnu: python-scikit-learn-extra: Disable one test.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-scikit-learn-extra) [arguments]: Disable one test. Change-Id: Idee17402250a55ca564724f00550ef36664982f6
2025-01-20gnu: python-scikit-fuzzy: Add missing inputs.Ricardo Wurmus
* gnu/packages/python-science.scm (python-scikit-fuzzy)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: Idbaf5fa622b3584f8fd348ec0783605936d3bf41
2025-01-20gnu: python-scikit-allel: Update to 1.3.13.Ricardo Wurmus
* gnu/packages/python-science.scm (python-scikit-allel): Update to 1.3.13. [propagated-inputs]: Remove python-click. [native-inputs]: Remove python-scipy. Change-Id: I3c29bd3d9f87d0866da747c344740bad71cae1c3
2025-01-20gnu: python-resolvelib: Update to 1.1.0b1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-resolvelib): Update to 1.1.0b1. [build-system]: Use pyproject-build-system. [arguments]: Remove. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: Ida8eb599bcfc02e84fc95ac276fba4ba217a6511
2025-01-20gnu: python-resampy: Update to 0.4.3.Ricardo Wurmus
* gnu/packages/audio.scm (python-resampy): Update to 0.4.3. [arguments]: Remove. [build-system]: Use pyproject-build-system. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: I79d0a460d4646c5fde3aec9314d9ccc6380002de
2025-01-20gnu: python-pytest-tornado5: Add missing inputs.Ricardo Wurmus
* gnu/packages/check.scm (python-pytest-tornado5)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I0b64ac5f3e50893cb3fab518c9779d2cd7b9c6a9
2025-01-20gnu: Remove python-pathlib.Ricardo Wurmus
This package is obsolete, the module it provides is part of the standard library, and the package has no users. * gnu/packages/python-xyz.scm (python-pathlib): Remove variable. Change-Id: I8c724ba7b62ad5602f6abdb4e5fdaf2806180ab5
2025-01-20gnu: rust-jiter-0.2: Add missing input.Ricardo Wurmus
* gnu/packages/crates-io.scm (rust-jiter-0.2)[native-inputs]: Add python-minimal-wrapper. Change-Id: Ieab1e0a1e3329528fc21a160669e7ea8376c0e5f
2025-01-20gnu: python-cachecontrol-0.11: Add missing inputs.Ricardo Wurmus
* gnu/packages/python-web.scm (python-cachecontrol-0.11)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I02091636a09a92093af109b044614fe617a5dd4c
2025-01-20gnu: python-liana-py: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-liana-py): Update to 1.4.0. [arguments]: Adjust disabled tests. Change-Id: I9245285e2d043b5e7cbce5fb95a30982cd981597
2025-01-20gnu: python-mizani: Add missing input.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-mizani)[native-inputs]: Add python-wheel. Change-Id: I9a1a7a4ee38db7a48e14069efb2b7b97dad32a80
2025-01-20gnu: python-decoupler-py: Add missing input.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-decoupler-py)[native-inputs]: Add python-wheel. Change-Id: I37b8162e0dde4513b3a6f94455315489d7d08499
2025-01-20gnu: python-cell2cell: Add missing input.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-cell2cell)[native-inputs]: Add python-wheel. Change-Id: I79015fa48c976489d4c1182cb4506aae139325ad
2025-01-20gnu: python-gseapy: Add missing input.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-gseapy)[native-inputs]: Add python-wheel. Change-Id: I0ce3d3aeb5aa3fb1ab3f2aa524b066738cf9046a
2025-01-20gnu: python-cattrs: Disable failing test.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-cattrs)[arguments]: Disable one more test. Change-Id: I8296abaa2faa745404354cb26f0d08024e7960c8
2025-01-20gnu: python-mudata: Update to 0.3.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-mudata): Update to 0.3.1. [arguments]: Add phase 'pretend-version. [native-inputs]: Remove python-flit-core; add python-hatch-vcs and python-hatchling. Change-Id: I87b8dc6ec557e0ca69930d82db7d6e64727228e9
2025-01-20gnu: python-locust: Disable some more tests.Ricardo Wurmus
* gnu/packages/benchmark.scm (python-locust)[arguments]: Update list of disabled tests. Change-Id: I3d6d070a1cc771c006530454b0bb9506287bbe6b
2025-01-20gnu: python-locust: Update to 2.32.5.Ricardo Wurmus
* gnu/packages/benchmark.scm (python-locust): Update to 2.32.5. [source]: Get from git repository. [build-system]: Use pyproject-build-system. [arguments]: Update list of disabled tests; remove custom 'check phase; add phase 'fix-version. [propagated-inputs]: Remove python-flask-basicauth and python-roundrobin; add python-flask-login, python-setuptools, and python-tomli. [native-inputs]: Add nss-certs-for-test, python-poetry-core, and python-poetry-dynamic-versioning; remove python-mock and python-setuptools-scm. Change-Id: I5e7203d48eda9279531c9d3060d81d91974dee6e
2025-01-20gnu: python-flask-assets: Update to 2.1.0-1.62efd23.Ricardo Wurmus
* gnu/packages/python-web.scm (python-flask-assets): Update to 2.1.0-1.62efd23. [source]: Fetch from git repository. [build-system]: Use pyproject-build-system. [native-inputs]: Add nss-certs-for-test, python-pytest, python-setuptools, and python-wheel. Change-Id: I8c3dedb39d4cc1e51d9c3ef9fe9298586f871736
2025-01-20gnu: python-webassets: Fix build.Ricardo Wurmus
* gnu/packages/python-web.scm (python-webassets)[arguments]: Delete broken tests; run tests with nosetests. [propagated-inputs]: Add python-pyyaml. [native-inputs]: Remove python-pytest. Change-Id: Iee1a38b02770259d11e4c7f6eff5d25c6be52ff9
2025-01-20gnu: Remove python-flask-basicauth.Ricardo Wurmus
This project is abandoned and has test failures that indicate that it doesn't actually work properly anymore. * gnu/packages/python-web.scm (python-flask-basicauth): Remove variable. Change-Id: I828bd5409d71d45c5549e74deba3edecbfac4572
2025-01-20gnu: python-flask-login: Update to 0.6.3.Ricardo Wurmus
* gnu/packages/python-web.scm (python-flask-login): Update to 0.6.3. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: Ie1dc0ffccc11172e21d0013d84c064b8c2793e5f
2025-01-20gnu: python-flask-htpasswd: Update to 0.5.0.Ricardo Wurmus
* gnu/packages/python-web.scm (python-flask-htpasswd): Update to 0.5.0. [build-system]: Use pyproject-build-system. [arguments]: Disable tests. Change-Id: I24ec759fcfbfef3b64f5ca730ed43bf48690288b
2025-01-20gnu: python-scanpy: Update to 1.10.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.10.4. [arguments]: Update list of disabled tests; rename phase 'discover-anndata to 'add-anndata-source. [native-inputs]: Add python-pytest-mock. Change-Id: I409678c67d15f3d3e4147be68c7a987c0e095d23
2025-01-20gnu: python-legacy-api-wrap: Update to 1.4.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-legacy-api-wrap): Update to 1.4.1. [build-system]: Use pyproject-build-system. [native-inputs]: Add python-coverage, python-hatch-vcs, python-hatchling, and python-pytest. [propagated-inputs]: Remove python-get-version, python-pytest, python-pytest-black, python-pytest-cov, and python-setuptools. Change-Id: I56ccdc6c9fd8b5e6bcbfcf9255f02949e8f1e705
2025-01-20gnu: python-omnipath: Update to 1.0.8-0.3d16134.Ricardo Wurmus
* gnu/packages/python-web.scm (python-omnipath): Update to 1.0.8-0.3d16134. [source]: Fetch from git repository. [arguments]: Remove phase 'relax; update list of disabled tests; add phase 'pretend-version. [native-inputs]: Add nss-certs-for-test. Change-Id: I9e980702ac8e5662971a9c4bb88a5789758b48ed
2025-01-20gnu: python-pypika-tortoise: Add missing input.Ricardo Wurmus
* gnu/packages/databases.scm (python-pypika-tortoise)[native-inputs]: Add python-setuptools. Change-Id: Ibe96738292a0948cae2add596fe76ee349c9dfeb
2025-01-20gnu: python-asgi-lifespan: Update to 2.1.0.Ricardo Wurmus
* gnu/packages/python-web.scm (python-asgi-lifespan): Update to 2.1.0. [arguments]: Update list of disabled tests; add phase 'compatibility. [native-inputs]: Add python-httpx. Change-Id: Ib4c01ec059920481eefbbe908ba2fdaa9cf3484d
2025-01-20gnu: python-fastapi-pagination-minimal: Update to 0.12.34.Ricardo Wurmus
* gnu/packages/python-web.scm (python-fastapi-pagination-minimal): Update to 0.12.34. [propagated-inputs]: Replace python-pydantic with python-pydantic-2. [native-inputs]: Replace poetry with python-poetry-core. (python-fastapi-pagination)[arguments]: Run unit tests; add phase 'patch-tests. [propagated-inputs]: Replace python-pydantic with python-pydantic-2. [native-inputs]: Add python-aiosqlite, python-asgi-lifespan, python-asyncpg, python-faker, python-httpx, python-poetry-core, python-pytest, python-pytest-asyncio, python-sqlalchemy, and python-typing-extensions. Change-Id: Icab22aa811c70762296ef47723052702b33c6762
2025-01-20gnu: python-anndata: Update to 0.11.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-anndata): Update to 0.11.1. [arguments]: Update list of disabled tests; do not patch conftest. [native-inputs]: Add python-pytest-mock. Change-Id: I6f087bb19a71006fd9f9c2c92150fa4d038fa2a6
2025-01-20guix: toml: Fix evaluation of empty inline tables.Lars-Dominik Braun
* guix/build/toml.scm (eval-toml-file): Add pattern for empty inline table. * tests/toml.scm ("parse-toml: Empty inline table"): New testcase. Change-Id: I69663af2a861716acfb801fad4474e029e102a1b
2025-01-20gnu: python-wrapt: Update to 1.17.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-wrapt): Update to 1.17.0. [arguments]: Enable tests. [native-inputs]: Add python-pytest, python-setuptools, and python-wheel. Change-Id: Ib2e973ec7b09454588bbbbdd5d8446afc53e835b
2025-01-20gnu: python-pytorch-geometric: Disable one test.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-pytorch-geometric)[arguments]: Disable one more test. Change-Id: Id69243e70c39b9307745b08156ed956f23d8daa4
2025-01-20gnu: Remove python-starlette-for-fastapi-0.88.Ricardo Wurmus
* gnu/packages/python-web.scm (python-starlette-for-fastapi-0.88): Delete variable. Change-Id: Idf8b453834dee2051cec8b7fc34f6681aa8480c6
2025-01-20gnu: python-fastapi: Relax requirements.Ricardo Wurmus
* gnu/packages/python-web.scm (python-fastapi)[arguments]: Add phase 'relax-requirements. Change-Id: I639d894eb1ee207cddcaa52344e48291c7a2a5c9
2025-01-20gnu: python-starsessions: Disable one more test.Ricardo Wurmus
* gnu/packages/python-web.scm (python-starsessions)[arguments]: Disable one more test. Change-Id: I9a10805eb73f829f12f2b41d1d25b6c41693c9ef
2025-01-20gnu: python-starsessions: Update input.Ricardo Wurmus
* gnu/packages/python-web.scm (python-starsessions)[propagated-inputs]: Replace python-starlette-for-fastapi-0.88 with python-starlette. Change-Id: I07d5bf85ae9980e862dad456d2cde7f1adc1a0ff
2025-01-20gnu: Remove python-fastapi-for-pytorch-lightning.Ricardo Wurmus
* gnu/packages/python-web.scm (python-fastapi-for-pytorch-lightning): Remove variable. Change-Id: I5cc49baae28ee512698e2e4e25ed99b3655d653a
2025-01-20gnu: Rename python-starsessions-for-pytorch-lightning.Ricardo Wurmus
* gnu/packages/python-web.scm (python-starsessions-for-pytorch-lightning): Rename this variable... (python-starsessions): ...to this. Change-Id: I237b83f380ce0cd4aee5021f646e66700eeec746
2025-01-20gnu: python-lightning-cloud: Update to 0.5.70.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-lightning-cloud): Update to 0.5.70. [propagated-inputs]: Add python-boto3 and python-protobuf; replace python-fastapi-for-pytorch-lightning with python-fastapi. Change-Id: I4c93a0120639af230fdaf53703c688ce3012e8e0
2025-01-20gnu: python-pytorch-lightning: Update to 2.5.0.post0.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-pytorch-lightning): Update to 2.5.0.post0. [arguments]: Only run core tests. [propagated-inputs]: Replace python-fastapi-for-pytorch-lightning with python-fastapi; remove python-starsessions-for-pytorch-lightning. Change-Id: I1bf392e19cc06194fdf662f07aeccbafc8d0ae4e
2025-01-20gnu: python-path-bootstrap: Update to 17.1.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-path-bootstrap): Update to 17.1.0. Change-Id: I7a83d6cffb2b3818691eaae3a3c787da3c60ff72
2025-01-20gnu: python-fastapi: Update to 0.115.6.Ricardo Wurmus
* gnu/packages/python-web.scm (python-fastapi): Update to 0.115.6. [arguments]: Update list of disabled tests. [propagated-inputs]: Add python-fastapi-cli, python-pydantic-2, and python-pydantic-settings; remove python-pydantic. [native-inputs]: Delete python-databases, python-isort, python-jose, python-mypy, python-hatchling, python-passlib, python-peewee, python-types-orjson, and python-types-ujson. Change-Id: Id2ea9e1376dbfb654a62e6b8218c49adeda68014
2025-01-20gnu: python-pydantic-settings: Update to 2.7.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pydantic-settings): Update to 2.7.1. [arguments]: Ignore tests from test_docs.py. [propagated-inputs]: Remove python-pyaml and python-tomli. Change-Id: Ie43e098c1a7787923a3cc92313832089b835a986
2025-01-20gnu: Add python-fastapi-cli.Ricardo Wurmus
* gnu/packages/python-web.scm (python-fastapi-cli): New variable. Change-Id: Id20edf30e9c4ba59bc010a96f219cafbcb7ea31e
2025-01-20gnu: python-pdm-backend: Update to 2.4.3.Ricardo Wurmus
* gnu/packages/python-build.scm (python-pdm-backend): Update to 2.4.3. Change-Id: If022f4e85ce7434167cd2eec485ba56e882e4543
2025-01-20gnu: Add python-rich-toolkit.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-rich-toolkit): New variable. Change-Id: I1a5f0d9e8241fef0396aaed534b373d2670c48ad
2025-01-20gnu: python-pydantic-2: Update to 2.10.4.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pydantic-2): Update to 2.10.4. [arguments]: Run more tests. [native-inputs]: Remove python-cloudpickle. [propagated-inputs]: Add python-rich. Change-Id: I8c682d63a7b137c8e9dd1a0b890080f8e5d91cd9
2025-01-20gnu: python-pydantic-core: Update to 2.27.2.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pydantic-core): Update to 2.27.2. [arguments]<cargo-inputs>: Replace rust-idna-0.4 with rust-idna-0.5, rust-jiter-0.2 with rust-jiter-0.7, rust-strum-0.26 with rust-strum-0.25, rust-strum-macros-0.26 with rust-strum-macros-0.25, and rust-speedate-0.14 with rust-speedate-0.15. Change-Id: Ie98eae8dee62aae9b916fd32c2d8c5f757cb01a7
generated by cgit v1.2.3 (git 2.45.2) at 2025-04-30 17:42:55 +0000