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authorRicardo Wurmus <[email protected]>2024-04-29 12:05:30 +0200
committerRicardo Wurmus <[email protected]>2024-05-05 22:38:15 +0200
commit83262c971e77552978e3482421256096d8878d2b (patch)
tree4cac600714b527cb45134a7a03afef149a2b3446 /gnu/packages/python-xyz.scm
parent407fcd510b1bbcd94a7bc1a6f7deedcfc9789003 (diff)
gnu: Add python-multiscale-spatial-image.
* gnu/packages/python-xyz.scm (python-multiscale-spatial-image): New variable. Change-Id: I05a0b3a93091148917fade831faefb88c13bbc6f
Diffstat (limited to 'gnu/packages/python-xyz.scm')
-rw-r--r--gnu/packages/python-xyz.scm41
1 files changed, 41 insertions, 0 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 278a0ecd9b..e93020f6a7 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -8465,6 +8465,47 @@ easily generalized like @dfn{compressed sparse row/column}(CSR/CSC) and
depends on @code{scipy.sparse} for some computations.")
(license license:bsd-3)))
+(define-public python-multiscale-spatial-image
+ (package
+ (name "python-multiscale-spatial-image")
+ (version "1.0.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "multiscale_spatial_image" version))
+ (sha256
+ (base32 "01kcagjy797hbz5an9cp8wcl5krgp21yb7ibfimvpidb3jp5lfhb"))))
+ (build-system pyproject-build-system)
+ ;; All interesting tests require file downloads over IPFS.
+ (arguments (list #:tests? #false))
+ (propagated-inputs
+ (list `(,insight-toolkit "python")
+ python-dask
+ python-dask-image
+ python-numpy
+ python-spatial-image
+ python-xarray
+ python-xarray-datatree))
+ (native-inputs
+ (list python-fsspec
+ python-hatchling
+ python-ipfsspec
+ python-jsonschema
+ python-nbmake
+ python-pooch
+ python-pytest
+ python-pytest-mypy
+ python-urllib3
+ python-zarr))
+ (home-page "https://github.com/spatial-image/multiscale-spatial-image")
+ (synopsis "Multi-dimensional spatial image data structure")
+ (description
+ "This package lets you generate a multiscale, chunked, multi-dimensional
+spatial image data structure that can serialized to OME-NGFF. Each scale is a
+scientific Python Xarray spatial-image Dataset, organized into nodes of an
+Xarray Datatree.")
+ (license license:asl2.0)))
+
(define-public python-spectra
(package
(name "python-spectra")