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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-11-27 18:32:42 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-12-03 16:59:55 +0100 |
| commit | aae349d50f2cc8a91ea8400757cb8938e0ea633c (patch) | |
| tree | 9c1166753d835ad085cfea500295eff906491e6f /gnu/packages/bioconductor.scm | |
| parent | 3e956d6adfc29eef501aa3ec406eecf2c1c15387 (diff) | |
gnu: r-escape: Add missing input.
* gnu/packages/bioconductor.scm (r-escape)[native-inputs]: Add r-seurat.
[arguments]: Add phase 'delete-bad-tests.
Change-Id: Ie86501a4d283e3dab863bcda5e6cc63cd98d847c
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 10 |
1 files changed, 9 insertions, 1 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 9251cec3ae..6d8b9142f4 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1418,6 +1418,14 @@ Ensembl.") (base32 "0874r80za3kxf9vc9arz8ncsddqffzi6a28vivaah293kg23nc0m")))) (properties `((upstream-name . "escape"))) (build-system r-build-system) + (arguments + (list + #:phases + '(modify-phases %standard-phases + (add-after 'unpack 'delete-bad-tests + (lambda _ + ;; This one test fails with accuracy errors. + (delete-file "tests/testthat/test-performPCA.R")))))) (propagated-inputs (list r-aucell r-biocparallel r-dplyr @@ -1437,7 +1445,7 @@ Ensembl.") r-stringr r-summarizedexperiment r-ucell)) - (native-inputs (list r-knitr r-testthat)) + (native-inputs (list r-knitr r-seurat r-testthat)) (home-page "https://bioconductor.org/packages/escape") (synopsis "Single cell analysis platform for enrichment") (description |