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authorRicardo Wurmus <[email protected]>2024-11-26 11:47:00 +0100
committerRicardo Wurmus <[email protected]>2024-12-03 16:59:42 +0100
commit8c085296081b3fb2c7ffd20fd017d4f2aef79996 (patch)
tree163b3b17fd51c9db490f9827ea4b74286c1baa44 /gnu/packages/bioconductor.scm
parent7cc00303ec4563bf9444e8708408cdece8873ae2 (diff)
gnu: Add r-systempiperdata.
* gnu/packages/bioconductor.scm (r-systempiperdata): New variable. Change-Id: I125e8003073ffc5fa7f20d3efa0f3ead71eaafe3
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm26
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 372996019b..fd01644f7e 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2942,6 +2942,32 @@ currently supports human array (HM27, HM450, EPIC), mouse array (MM285) and
the @code{HorvathMethylChip40} (Mammal40) array.")
(license license:artistic2.0)))
+(define-public r-systempiperdata
+ (package
+ (name "r-systempiperdata")
+ (version "2.10.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "systemPipeRdata" version
+ 'experiment))
+ (sha256
+ (base32 "0276cyzcd9pzma9s4f300snlkyq2xlnavbwm8rwvn22dpgzapskd"))))
+ (properties `((upstream-name . "systemPipeRdata")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biocgenerics r-biostrings r-jsonlite r-remotes))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/tgirke/systemPipeRdata")
+ (synopsis "Workflow templates and sample data")
+ (description
+ "@code{systemPipeRdata} complements the @code{systemPipeR} workflow
+management system (WMS) by offering a collection of pre-designed data analysis
+workflow templates. These templates are easily accessible and can be readily
+loaded onto a user's system with a single command. Once loaded, the WMS can
+immediately utilize these templates for efficient end-to-end analysis, serving
+a wide range of data analysis needs.")
+ (license license:artistic2.0)))
+
(define-public r-tcgabiolinksgui-data
(package
(name "r-tcgabiolinksgui-data")