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| author | Ricardo Wurmus <[email protected]> | 2024-11-26 11:47:42 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <[email protected]> | 2024-12-03 16:59:42 +0100 |
| commit | 5460c2aed84be008d90c1e7d42946a5a6b6adcca (patch) | |
| tree | 9f6740cb11995a620a24b274f8502398e3bdc039 /gnu/packages/bioconductor.scm | |
| parent | 877c366285f11df539af68fcc4e0495fa2580806 (diff) | |
gnu: r-systempiper: Add missing inputs and disable tests.
* gnu/packages/bioconductor.scm (r-systempiper)[native-inputs]: Add
r-systempiperdata.
[arguments]: Disable tests.
Change-Id: Ic071bbcb53ef9fb96385fbbdb5725ed2a4490db7
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 4 |
1 files changed, 3 insertions, 1 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 70773e3ffd..4f4189f456 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -13012,6 +13012,8 @@ unmodeled, or latent sources of noise.") "1f27vb03x1vmhi9nmizfzrvkyczhgrsgmc5fcf5xnyfmmhs97cnr")))) (properties `((upstream-name . "systemPipeR"))) (build-system r-build-system) + ;; Tests fail because genWorkenvir fails to set up the environment. + (arguments (list #:tests? #false)) (propagated-inputs (list r-biocgenerics r-biostrings @@ -13027,7 +13029,7 @@ unmodeled, or latent sources of noise.") r-summarizedexperiment r-yaml)) (native-inputs - (list r-knitr r-testthat)) + (list r-knitr r-systempiperdata r-testthat)) (home-page "https://github.com/tgirke/systemPipeR") (synopsis "Next generation sequencing workflow and reporting environment") (description |