diff options
author | Ricardo Wurmus <[email protected]> | 2023-07-19 14:57:07 +0200 |
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committer | Ricardo Wurmus <[email protected]> | 2023-07-19 14:57:07 +0200 |
commit | f77216721e20f471f7989590422c595f80d70534 (patch) | |
tree | 6df19fd1bb4d8682bffe1a9288b87f249646abbe | |
parent | b7d3a9e2f5395d71498bafffa2f4d800bf8572c1 (diff) |
gnu: Add r-plyranges.
* gnu/packages/bioconductor.scm (r-plyranges): New variable.
-rw-r--r-- | gnu/packages/bioconductor.scm | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 58294f8a3e..69c054e4c7 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11263,6 +11263,40 @@ PLGEM has been shown to improve the detection of differentially expressed genes or proteins in these datasets.") (license license:gpl2))) +(define-public r-plyranges + (package + (name "r-plyranges") + (version "1.20.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "plyranges" version)) + (sha256 + (base32 + "1qv8snpcxpg16v5ji7sq3bnmgrgghz9h4mh246mcnnxfhi44b6nv")))) + (properties `((upstream-name . "plyranges"))) + (build-system r-build-system) + (propagated-inputs (list r-biocgenerics + r-dplyr + r-genomeinfodb + r-genomicalignments + r-genomicranges + r-iranges + r-magrittr + r-rlang + r-rsamtools + r-rtracklayer + r-s4vectors + r-tidyselect)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/plyranges") + (synopsis "Fluent interface for manipulating GenomicRanges") + (description + "This package provides a dplyr-like interface for interacting with the +common Bioconductor classes @code{Ranges} and @code{GenomicRanges}. By +providing a grammatical and consistent way of manipulating these classes their +accessiblity for new Bioconductor users is hopefully increased.") + (license license:artistic2.0))) + (define-public r-inspect (package (name "r-inspect") |