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| author | Ricardo Wurmus <[email protected]> | 2024-11-27 17:15:07 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <[email protected]> | 2024-12-03 16:59:55 +0100 |
| commit | f577adac87004a0e7df7d3efa1517ba1dd074682 (patch) | |
| tree | 1f81e83bed849602bb790e1ae3c3e9907bf65df6 | |
| parent | 951bdcc92501eedc03aee107f517e8c9ee4fab7c (diff) | |
gnu: r-flowviz: Disable tests.
* gnu/packages/bioconductor.scm (r-flowviz)[arguments]: Disable tests.
[properties]: Tell updater to ignore r-flowstats.
[native-inputs]: Add r-ncdfflow.
Change-Id: Ic6123c745dbfc25c026646e92a230a62db483306
| -rw-r--r-- | gnu/packages/bioconductor.scm | 10 |
1 files changed, 8 insertions, 2 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 91b8964de6..1c1d47d71f 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -20187,8 +20187,14 @@ statistics to the plot.") (sha256 (base32 "1ymqx5zasrr5snmg71p58hk526yxpvs4d78df2hgxfah5w6vxd6w")))) - (properties `((upstream-name . "flowViz"))) + (properties + `((upstream-name . "flowViz") + ;; Avoid dependency cycle. + (updater-ignored-native-inputs . ("r-flowstats")))) (build-system r-build-system) + ;; There is only one test file and it depends on r-flowstats, which + ;; depends on this package. + (arguments (list #:tests? #false)) (propagated-inputs (list r-biobase r-flowcore @@ -20200,7 +20206,7 @@ statistics to the plot.") r-mass r-rcolorbrewer)) (native-inputs - (list r-knitr r-testthat)) + (list r-knitr r-ncdfflow r-testthat)) (home-page "https://bioconductor.org/packages/flowViz/") (synopsis "Visualization for flow cytometry") (description |