Rename to org-gnosis-ui & remove org-roam specific functions.

1 files changed, 0 insertions, 823 deletions

diff --git a/org-roam-ui.el b/org-roam-ui.el
deleted file mode 100644
index 775b3ea..0000000
--- a/org-roam-ui.el
+++ /dev/null
@@ -1,823 +0,0 @@
-;;; org-roam-ui.el --- User Interface for Org-roam -*- coding: utf-8; lexical-binding: t; -*-
-
-;; Copyright © 2021 Kirill Rogovoy, Thomas F. K. Jorna
-
-;; author: Kirill Rogovoy, Thomas Jorna
-;; URL: https://github.com/org-roam/org-roam-ui
-;; Keywords: files outlines
-;; Version: 0.1
-;; Package-Requires: ((emacs "27.1") (simple-httpd "20191103.1446") (websocket "1.13"))
-
-;; This file is NOT part of GNU Emacs.
-
-;; This program is free software; you can redistribute it and/or modify
-;; it under the terms of the GNU General Public License as published by
-;; the Free Software Foundation; either version 3, or (at your option)
-;; any later version.
-;;
-;; This program is distributed in the hope that it will be useful,
-;; but WITHOUT ANY WARRANTY; without even the implied warranty of
-;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-;; GNU General Public License for more details.
-;;
-;; You should have received a copy of the GNU General Public License
-;; along with GNU Emacs; see the file COPYING.  If not, write to the
-;; Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor,
-;; Boston, MA 02110-1301, USA.
-
-;;; Commentary:
-;;
-;;  Org-roam-ui provides a web interface for navigating around notes created
-;;  within Org-roam.
-;;
-;;; Code:
-
-;; (use-package simple-httpd
-;;   :vc (:url "https://github.com/skeeto/emacs-web-server/"))
-
-;;;; Dependencies
-(require 'json)
-(require 'simple-httpd)
-(require 'org-gnosis)
-(require 'websocket)
-
-(defgroup org-roam-ui nil
-  "UI in Org-roam."
-  :group 'org-roam-ui
-  :prefix "org-roam-ui-"
-  :link '(url-link :tag "Github" "https://github.com/org-roam/org-roam-ui"))
-
-(defcustom org-roam-ui-directory org-gnosis-dir
-  "Directory of org-roam-ui notes."
-  :group 'org-roam-ui
-  :type 'directory)
-
-(defcustom org-roam-ui-port 35902
-  "Roam UI Port."
-  :group 'org-roam-ui
-  :type 'number)
-
-(defcustom org-roam-ui-sync-theme nil
-  "If true, sync your current Emacs theme with `org-roam-ui'.
-Works best with doom-themes.
-Ignored if a custom theme is provied for variable 'org-roam-ui-custom-theme'."
-  :group 'org-roam-ui
-  :type 'boolean)
-
-(defcustom org-roam-ui-dailies-directory org-gnosis-journal-dir
-  "Dailies/Journaling directory."
-  :group 'org-roam-ui
-  :type 'directory)
-
-(defcustom org-roam-ui-custom-theme nil
-  "Custom theme for `org-roam-ui'.
-Blocks 'org-roam-ui-sync-theme from syncing your current theme,
-instead sync this theme.
-Provide a list of cons with the following values:
-bg, bg-alt, fg, fg-alt, red, orange, yellow, green, cyan, blue, violet, magenta.
-E.g. '((bg . \"#1E2029\")
-\(bg-alt . \"#282a36\")
-\(fg . \"#f8f8f2\")
-\(fg-alt . \"#6272a\")
-\(red . \"#ff5555\")
-\(orange . \"#f1fa8c\")
-\(yellow .\"#ffb86c\")
-\(green . \"#50fa7b\")
-\(cyan . \"#8be9fd\")
-\(blue . \"#ff79c6\")
-\(violet . \"#8be9fd\")
-\(magenta . \"#bd93f9\"))."
-  :group 'org-roam-ui
-  :type 'list)
-
-(defcustom org-roam-ui-follow t
-  "If true, `org-roam-ui' will follow you around in the graph."
-  :group 'org-roam-ui
-  :type 'boolean)
-
-(defcustom org-roam-ui-update-on-save t
-  "If true, `org-roam-ui' will send new data when you save an `org-roam' buffer.
-This can lead to some jank."
-  :group 'org-roam-ui
-  :type 'boolean)
-
-(defcustom org-roam-ui-open-on-start t
-  "Whether to open your default browser when `org-roam-ui' launces."
-  :group 'org-roam-ui
-  :type 'boolean)
-
-(defcustom org-roam-ui-find-ref-title t
-  "Should `org-roam-ui' use `org-roam-bibtex' to find a reference's title?"
-  :group 'org-roam-ui
-  :type 'boolean)
-
-(defcustom org-roam-ui-retitle-ref-nodes t
-  "Should `org-roam-ui' use `org-roam-bibtex' try to retitle reference nodes?"
-  :group 'org-roam-ui
-  :type 'boolean)
-
-(defcustom org-roam-ui-ref-title-template
-  "%^{author-abbrev} (%^{year}) %^{title}"
-  "A template for title creation, used for references without associated nodes.
-
-This uses `orb--pre-expand-template' under the hood and therefore only org-style
-capture `%^{...}' are supported."
-  :group 'org-roam-ui
-  :type 'string)
-
-(defcustom org-roam-ui-browser-function #'browse-url
-  "When non-nil launch org-roam-ui with a different browser function.
-Takes a function name, such as #'browse-url-chromium.
-Defaults to #'browse-url."
-  :group 'org-roam-ui
-  :type 'function)
-
-(defcustom org-roam-ui-tags-function #'(lambda () (org-gnosis-select '* 'tags '1=1 t))
-  "Function that returns all tags as a list."
-  :group 'org-roam-ui
-  :type 'function)
-
-(defcustom org-roam-ui-nodes-function #'org-roam-ui-get-nodes
-  "Function that returns nodes."
-  :group 'org-roam-ui
-  :type 'function)
-
-(defcustom org-roam-ui-links-function #'(lambda () (org-gnosis-select '* 'links))
-  "Function that returns links."
-  :group 'org-roam-ui
-  :type 'function)
-
-;;Hooks
-
-(defcustom org-roam-ui-before-open-node-functions nil
-  "Functions to run before a node is opened through org-roam-ui.
-Take ID as string as sole argument."
-  :group 'org-roam-ui
-  :type 'hook)
-
-(defcustom org-roam-ui-after-open-node-functions nil
-  "Functions to run after a node is opened through org-roam-ui.
-Take ID as string as sole argument."
-  :group 'org-roam-ui
-  :type 'hook)
-
-(defcustom org-roam-ui-latex-macros nil
-  "Alist of LaTeX macros to be passed to org-roam-ui.
-Format as, i.e. with double backslashes for a single backslash:
-'((\"\\macro\".\"\\something{#1}\"))"
-  :group 'org-roam-ui
-  :type 'alist)
-
-;; Internal vars
-
-(defvar org-roam-ui-root-dir
-  (concat (file-name-directory
-           (expand-file-name (or
-                    load-file-name
-                    buffer-file-name)))
-          ".")
-  "Root directory of the org-roam-ui project.")
-
-(defvar org-roam-ui-app-build-dir
-  (expand-file-name "./out/" org-roam-ui-root-dir)
-  "Directory containing org-roam-ui's web build.")
-
-(defvar org-roam-ui--ws-current-node nil
-  "Var to keep track of which node you are looking at.")
-
-(defvar org-roam-ui-ws-socket nil
-  "The websocket for org-roam-ui.")
-
-(defvar org-roam-ui--window nil
-  "The window for displaying nodes opened from within ORUI.
-This is mostly to prevent issues with EXWM and the Webkit browser.")
-
-(defvar org-roam-ui-ws-server nil
-  "The websocket server for org-roam-ui.")
-
-;;;###autoload
-(define-minor-mode
-  org-roam-ui-mode
-  "Enable org-roam-ui.
-This serves the web-build and API over HTTP."
-  :lighter " org-roam-ui"
-  :global t
-  :group 'org-roam-ui
-  :init-value nil
-  (cond
-   (org-roam-ui-mode
-   ;;; check if the default keywords actually exist on `orb-preformat-keywords'
-   ;;; else add them
-    (setq-local httpd-port org-roam-ui-port)
-    (setq httpd-root org-roam-ui-app-build-dir)
-    (httpd-start)
-    (setq org-roam-ui-ws-server
-          (websocket-server
-           35903
-           :host 'local
-           :on-open #'org-roam-ui--ws-on-open
-           :on-message #'org-roam-ui--ws-on-message
-           :on-close #'org-roam-ui--ws-on-close))
-    (when org-roam-ui-open-on-start (org-roam-ui-open)))
-   (t
-    (progn
-      (websocket-server-close org-roam-ui-ws-server)
-      (httpd-stop)
-      (remove-hook 'after-save-hook #'org-roam-ui--on-save)
-      (org-roam-ui-follow-mode -1)))))
-
-(defun org-roam-ui--log-data (message data)
-  "Log MESSAGE along with DATA for debugging purposes."
-  (message "%s: %s" message (if (stringp data) data (prin1-to-string data))))
-
-(defun org-roam-ui--ws-on-open (ws)
-  "Open the websocket WS to org-roam-ui and send initial data."
-  (when (websocket-openp ws)
-    (setq org-roam-ui-ws-socket ws)
-    (org-roam-ui--log-data "WebSocket opened." nil)
-    (condition-case err
-        (progn
-          (org-roam-ui--send-variables ws)
-          (org-roam-ui--send-graphdata))
-      (error (message "Error while sending data on open: %S" err)))
-    (when org-roam-ui-update-on-save
-      (add-hook 'after-save-hook #'org-roam-ui--on-save))
-    (when org-roam-ui-follow
-      (org-roam-ui-follow-mode 1))
-    (message "Connection established with org-roam-ui.")))
-
-(defun org-roam-ui--ws-on-message (_ws frame)
-  "Functions to run when the org-roam-ui server receives a message.
-Takes _WS and FRAME as arguments."
-  (let* ((msg (json-parse-string
-               (websocket-frame-text frame) :object-type 'alist))
-         (command (alist-get 'command msg))
-         (data (alist-get 'data msg)))
-    (cond ((string= command "open")
-           (org-roam-ui--on-msg-open-node data))
-          ((string= command "delete")
-           (org-roam-ui--on-msg-delete-node data))
-          ((string= command "create")
-           (org-roam-ui--on-msg-create-node data))
-          (t
-           (message
-            "Something went wrong when receiving a message from org-roam-ui")))))
-
-(defun org-roam-ui--on-msg-open-node (data)
-  "Open a node when receiving DATA from the websocket."
-  (let* ((id (alist-get 'id data))
-          (node (org-roam-node-from-id id))
-          (pos (org-roam-node-point node))
-          (buf (find-file-noselect (org-roam-node-file node))))
-    (run-hook-with-args 'org-roam-ui-before-open-node-functions id)
-    (unless (window-live-p org-roam-ui--window)
-      (if-let ((windows (window-list))
-               (or-windows (seq-filter
-                            (lambda (window)
-                              (org-roam-buffer-p
-                               (window-buffer window))) windows))
-               (newest-window (car
-                               (seq-sort-by
-                                #'window-use-time #'> or-windows))))
-          (setq org-roam-ui--window newest-window)
-        (split-window-horizontally)
-        (setq org-roam-ui--window (frame-selected-window))))
-    (set-window-buffer org-roam-ui--window buf)
-    (select-window org-roam-ui--window)
-    (goto-char pos)
-    (run-hook-with-args 'org-roam-ui-after-open-node-functions id)))
-
-(defun org-roam-ui--on-msg-delete-node (data)
-  "Delete a node when receiving DATA from the websocket.
-
-TODO: Be able to delete individual nodes."
-  (progn
-    (message "Deleted %s" (alist-get 'file data))
-    (delete-file (alist-get 'file data))
-    (org-roam-db-sync)
-    (org-roam-ui--send-graphdata)))
-
-(defun org-roam-ui--on-msg-create-node (data)
-  "Create a node when receiving DATA from the websocket."
-  (progn
-    (if (and (fboundp #'orb-edit-note) (alist-get 'ROAM_REFS data))
-        (orb-edit-note (alist-get 'id data)))
-    (org-roam-capture-
-     :node (org-roam-node-create :title (alist-get 'title data))
-     :props '(:finalize find-file))))
-
-(defun org-roam-ui--ws-on-close (_websocket)
-  "What to do when _WEBSOCKET to org-roam-ui is closed."
-  (remove-hook 'after-save-hook #'org-roam-ui--on-save)
-  (org-roam-ui-follow-mode -1)
-  (message "Connection with org-roam-ui closed."))
-
-(defun org-roam-ui--get-text (id)
-  "Retrieve the text from org-node ID."
-  (let*
-      ((node (org-roam-populate (org-roam-node-create
-                                 :id id)))
-       (file (org-roam-node-file node)))
-    (org-roam-with-temp-buffer
-        file
-      (when (> (org-roam-node-level node) 0)
-        ;; Heading nodes have level 1 and greater.
-        (goto-char (org-roam-node-point node))
-        (org-narrow-to-element))
-      (buffer-substring-no-properties (buffer-end -1) (buffer-end 1)))))
-
-(defun org-roam-ui--send-text (id ws)
-  "Send the text from org-node ID through the websocket WS."
-  (let ((text (org-roam-ui--get-text id)))
-    (websocket-send-text ws
-                         (json-encode
-                          `((type . "orgText")
-                            (data . ,text))))))
-
-(defservlet* node/:id text/plain ()
-  "Servlet for accessing node content."
-  (insert (org-roam-ui--get-text (org-link-decode id)))
-  (httpd-send-header t "text/plain" 200 :Access-Control-Allow-Origin "*"))
-
-(defservlet* img/:file text/plain ()
-  "Servlet for accessing images found in org-roam files."
-  (progn
-    (httpd-send-file t (org-link-decode file))
-    (httpd-send-header t "text/plain" 200 :Access-Control-Allow-Origin "*")))
-
-(defun org-roam-ui--on-save ()
-  "Send graphdata on saving an org-roam buffer.
-
-TODO: Make this only send the changes to the graph data, not the complete graph."
-  (when (bound-and-true-p org-gnosis-mode)
-    (org-roam-ui--send-variables org-roam-ui-ws-socket)
-    (org-roam-ui--send-graphdata)))
-
-(defun org-roam-ui--check-orb-keywords ()
-  "Check if the default keywords are in `orb-preformat-keywords', if not, add them."
-  (when (and org-roam-ui-retitle-ref-nodes (boundp 'orb-preformat-keywords))
-    (dolist (keyword '("author-abbrev" "year" "title"))
-      (unless (seq-contains-p orb-preformat-keywords keyword)
-        (setq orb-preformat-keywords
-              (append orb-preformat-keywords (list keyword)))))))
-
-(defun org-roam-ui--find-ref-title (ref)
-  "Find the title of the bibtex entry keyed by `REF'.
-
-Requires `org-roam-bibtex' and `bibtex-completion' (a dependency of `orb') to be
-loaded. Returns `ref' if an entry could not be found."
-  (if (and org-roam-ui-find-ref-title
-           (fboundp 'bibtex-completion-get-entry)
-           (fboundp 'orb--pre-expand-template)
-           (boundp 'orb-preformat-keywords))
-      (if-let ((entry (bibtex-completion-get-entry ref))
-               (orb-preformat-keywords
-                (append orb-preformat-keywords
-                        '("author-abbrev" "year" "title"))))
-          ;; Create a fake capture template list, only the actual capture at 3
-          ;; matters. Interpolate the bibtex entries, and extract the filled
-          ;; template from the return value.
-          (nth 3 (orb--pre-expand-template
-                  `("" "" plain ,org-roam-ui-ref-title-template) entry))
-        ref)
-    ref))
-
-(defun org-roam-ui--replace-nth (el n lst)
-  "Non-destructively replace the `N'th element of `LST' with `EL'."
-  (let ((head (butlast lst (- (length lst) n)))
-        (tail (nthcdr (+ n 1) lst)))
-    (append head (list el) tail)))
-
-(defun org-roam-ui--citekey-to-ref (citekey)
-  "Convert a CITEKEY property (most likely with a `cite:' prefix) to just a key.
-
-This method is mostly taken from `org-roam-bibtex'
-see https://github.com/org-roam/org-roam-bibtex/blob/919ec8d837a7a3bd25232bdba17a0208efaefb2a/orb-utils.el#L289
-but is has been adapted to operate on a sting instead of a node. Requires
-`org-ref' to be loaded. Returns the `key' or nil if the format does not match
-the `org-ref-cite-re'"
-  (if-let ((boundp 'org-ref-cite-re)
-           (citekey-list (split-string-and-unquote citekey)))
-      (catch 'found
-        (dolist (c citekey-list)
-          (when (string-match org-ref-cite-re c)
-            (throw 'found (match-string 2 c)))))))
-
-(defun org-roam-ui--retitle-node (node)
-  "Replace the title of citation NODE with associated notes.
-
-A new title is created using information from the bibliography and formatted
-according to `org-roam-ui-ref-title-template', just like the citation nodes with
-a note are. It requires `org-roam-bibtex' and it's dependencies
-\(`bibtex-completion' and `org-ref'\) to be loaded.
-
-Returns the node with an updated title if the current node is a reference node
-and the key was found in the bibliography, otherwise the node is returned
-unchanged."
-  (if-let* (org-roam-ui-retitle-ref-nodes
-            ;; set a fake var because if-let(((boundp 'fake-var))) returns true
-            (orcr (boundp 'org-ref-cite-re))
-            (citekey (cdr (assoc "ROAM_REFS" (nth 5 node))))
-            (ref (org-roam-ui--citekey-to-ref citekey))
-            (title (org-roam-ui--find-ref-title ref)))
-      (org-roam-ui--replace-nth title 2 node)
-    node))
-
-(defun org-roam-ui--create-fake-node (ref)
-  "Create a fake node for REF without a source note."
-  (list
-   ref
-   ref
-   (org-roam-ui--find-ref-title ref)
-   0
-   0
-   'nil
-   `(("ROAM_REFS" . ,(format "cite:%s" ref))
-     ("FILELESS" . t))
-   'nil))
-
-(defun org-roam-ui-get-links (&optional old-db)
-  "Fetch links from the org-roam database.
-If OLD-DB is non-nil, use the older method of getting links."
-  (if old-db
-      (org-roam-ui--separate-ref-links
-       (org-roam-ui--get-links t))
-    (nconc (org-roam-ui--separate-ref-links
-            (org-roam-ui--get-cites))
-           (org-roam-ui--get-links))))
-
-(defun org-roam-ui-get-tags ()
-  "Fetch tags from the org-roam database."
-  (seq-mapcat #'seq-reverse
-              (org-roam-db-query
-               [:select :distinct tag :from tags])))
-
-(defun org-roam-ui-get-nodes (&optional nodes links-db)
-  "Fetch nodes and create fake nodes based on LINKS-DB.
-If NODES is provided, use it directly."
-  (let* ((nodes-db (or nodes (org-roam-ui--get-nodes)))
-         (fake-nodes (seq-map #'org-roam-ui--create-fake-node
-                              (delete-dups
-                               (mapcar #'cadr
-                                       (org-roam-ui--filter-citations links-db))))))
-    (append (if org-roam-ui-retitle-ref-nodes
-                (seq-map #'org-roam-ui--retitle-node nodes-db)
-              nodes-db)
-            fake-nodes)))
-
-(defun org-roam-ui--send-graphdata (&optional nodes links tags)
-  "Prepare and send graph data to org-roam-ui, optionally using NODES, LINKS, and TAGS.
-If not provided, data is retrieved from the org-roam database."
-  (let* ((links-db (or links (funcall org-roam-ui-links-function)))
-         (nodes-db (or nodes (funcall org-roam-ui-nodes-function)))
-         (tags-db (or tags (funcall org-roam-ui-tags-function)))
-         (nodes-alist '())
-         (links-alist '()))
-    
-    ;; Convert nodes to alist
-    (dolist (node nodes-db)
-      (push (org-roam-ui-sql-to-alist
-             '(id file title level pos olp properties tags) node)
-            nodes-alist))
-    
-    ;; Convert links to alist
-    (dolist (link links-db)
-      (push (org-roam-ui-sql-to-alist
-             '(source target type) link)
-            links-alist))
-    
-    (let ((response `((nodes . ,nodes-alist)
-                      (links . ,links-alist)
-                      (tags . ,tags-db))))
-      (websocket-send-text org-roam-ui-ws-socket
-                           (json-encode `((type . "graphdata") (data . ,response)))))))
-
-
-(defun org-roam-ui--filter-citations (links)
-  "Filter out the citations from LINKS."
-  (seq-filter
-   (lambda (link)
-     (string-match-p "cite" (nth 2 link)))
-   links))
-;;;; Databse query for org-roam
-;; (defun org-roam-ui-query ()
-;;   "Database query."
-;;   (org-roam-db-query
-;;    [:select [id
-;;              file
-;;              title
-;;              level
-;;              (funcall group-concat tag
-;;                       (emacsql-escape-raw \, ))]
-;;             :as tags
-;;             :from nodes
-;;             :left-join tags
-;;             :on (= id node_id)
-;;             :group :by id]))
-
-;; Query for gnosis
-(defun org-roam-ui-query ()
-  "Query to get nodes from org-gnosis db."
-  (emacsql org-gnosis-db
-	   [:select [id file title level
-			(funcall group-concat tag
-				 (emacsql-escape-raw \, ))]
-		    :from nodes
-		    :as tags
-		    :left-join tags
-		    :on (= id id)
-		    :group :by id]))
-
-(defun org-roam-ui--get-nodes ()
-  "Fetch nodes to display in org-roam-ui with properly structured output."
-  (mapcar (lambda (node)
-            (let ((id (nth 0 node))
-                  (file (nth 1 node))
-                  (title (nth 2 node))
-                  (level (nth 3 node))
-                  (tags (nth 4 node)))
-              ;; Construct the node structure with correct ordering
-              (list id
-                    file
-                    title
-                    level
-                    1 ;; Assume priority or similar static position value
-                    nil ;; This corresponds to the `position` from your desired output
-                    ;; Properties
-                    (list (cons "CATEGORY" (file-name-base file))
-                          (cons "ID" id)
-                          (cons "BLOCKED" "")
-                          (cons "ALLTAGS" (propertize (concat ":" tags ":") 'face 'org-tag)) ;; Assuming tags need to be formatted this way
-                          (cons "FILE" file)
-                          (cons "PRIORITY" "B"))
-                    tags))) ;; Put tags at the last position as per your requirement
-          (org-roam-ui-query)))
-
-(defun org-roam-ui--get-links (&optional old)
-  "Get the cites and links tables as rows from the org-roam db.
-Optionally set OLD to t to use the old db model (where the cites
-were in the same table as the links)."
-(if (not old)
-    (org-roam-db-query
-     `[:select  [links:source
-                 links:dest
-                 links:type]
-       :from links
-       :where (= links:type "id")])
-  ;; Left outer join on refs means any id link (or cite link without a
-  ;; corresponding node) will have 'nil for the `refs:node-id' value. Any
-  ;; cite link where a node has that `:ROAM_REFS:' will have a value.
-  (org-roam-db-query
-   `[:select [links:source
-              links:dest
-              links:type
-              refs:node-id]
-     :from links
-     :left :outer :join refs :on (= links:dest refs:ref)
-     :where (or
-             (= links:type "id")
-             (like links:type "%cite%"))])))
-
-(defun org-roam-ui--get-cites ()
-  "Get the citations when using the new db-model."
-  (org-roam-db-query
-   `[:select [citations:node-id citations:cite-key refs:node-id]
-     :from citations
-     :left :outer :join refs :on (= citations:cite-key refs:ref)]))
-
-(defun org-roam-ui--separate-ref-links (links &optional old)
-  "Create separate entries for LINKS with existing reference nodes.
-Optionally set OLD to t to support old citations db-model.
-
-Convert any cite links that have nodes with associated refs to an
-id based link of type `ref' while removing the 'nil `refs:node-id'
-from all other links."
-
- (if (not old)
-    (seq-map
-     (lambda (link)
-       (pcase-let ((`(,source ,dest ,node-id) link))
-         (if node-id
-             (list source node-id "ref")
-           (list source dest "cite"))))
-     links)
-   (seq-map
-    (lambda (link)
-      (pcase-let ((`(,source ,dest ,type ,node-id) link))
-        (if node-id
-            (list source node-id "ref")
-          (list source dest type))))
-    links)))
-
-(defun org-roam-ui--update-current-node ()
-  "Send the current node data to the web-socket."
-  (when (and (websocket-openp org-roam-ui-ws-socket)
-             (bound-and-true-p org-gnosis-mode)
-             (buffer-file-name (buffer-base-buffer)))
-    (let* ((node (org-gnosis-get-id)))
-      (setq org-roam-ui--ws-current-node node)
-      (websocket-send-text org-roam-ui-ws-socket
-                           (json-encode `((type . "command")
-                                          (data . ((commandName . "follow")
-                                                   (id . ,node))))))
-      ;; (unless (string= org-roam-ui--ws-current-node node)
-      ;;   (setq org-roam-ui--ws-current-node node)
-      ;;   (websocket-send-text org-roam-ui-ws-socket
-      ;;                        (json-encode `((type . "command")
-      ;;                                       (data . ((commandName . "follow")
-      ;;                                                (id . ,node)))))))
-      )))
-
-
-(defun org-roam-ui--update-theme ()
-  "Send the current theme data to the websocket."
-  (let  ((ui-theme (list nil)))
-    (if org-roam-ui-sync-theme
-        (if (boundp 'doom-themes--colors)
-            (let*
-                ((colors (butlast doom-themes--colors
-                                  (- (length doom-themes--colors) 25)))
-                 doom-theme)
-              (progn
-                (dolist (color colors)
-                  (push
-                   (cons (car color) (car (cdr color)))
-                   doom-theme)))
-              (setq ui-theme doom-theme))
-          (setq ui-theme (org-roam-ui-get-theme)))
-      (when org-roam-ui-custom-theme
-		(setq ui-theme org-roam-ui-custom-theme)))
-    ui-theme))
-
-
-(defun org-roam-ui--send-variables (ws)
-  "Send miscellaneous org-roam variables through the websocket WS."
-  (let ((daily-dir (or org-roam-ui-dailies-directory ""))
-        (attach-dir (or (and (boundp 'org-attach-id-dir) org-attach-id-dir)
-                        (expand-file-name ".attach/" org-directory)))
-        (use-inheritance (or (and (boundp 'org-attach-use-inheritance)
-                                  org-attach-use-inheritance)
-                             nil))
-        (sub-dirs (or (org-roam-ui-find-subdirectories) (list ""))))
-    (org-roam-ui--log-data "Sending variables"
-                           `(("subDirs" . ,sub-dirs)
-                             ("dailyDir" . ,daily-dir)
-                             ("attachDir" . ,attach-dir)
-                             ("useInheritance" . ,use-inheritance)
-                             ("roamDir" . ,(or org-roam-ui-directory ""))
-                             ("katexMacros" . ,(or org-roam-ui-latex-macros '()))))
-    (websocket-send-text ws
-                         (json-encode
-                          `((type . "variables")
-                            (data .
-                                  (("subDirs" . ,sub-dirs)
-                                   ("dailyDir" . ,daily-dir)
-                                   ("attachDir" . ,attach-dir)
-                                   ("useInheritance" . ,use-inheritance)
-                                   ("roamDir" . ,(or org-roam-ui-directory ""))
-                                   ("katexMacros" . ,(or org-roam-ui-latex-macros '())))))))))
-
-(defun org-roam-ui-sql-to-alist (column-names rows)
-  "Convert sql result to alist for json encoding.
-ROWS is the sql result, while COLUMN-names is the columns to use."
-  (let (res)
-    (while rows
-      (cond
-       ((not (string= (car column-names) "tags"))
-        (push (cons (pop column-names) (pop rows)) res))
-       ((string= (car column-names) "properties")
-	nil)
-       (t
-        (push (cons (pop column-names)
-                    (seq-remove
-                     (lambda (elt) (string= elt ","))
-                     rows))
-              res)
-        (setq rows nil))))
-    res))
-
-(defun org-roam-ui-get-theme ()
-  "Attempt to bring the current theme into a standardized format."
-  (list `(bg . ,(face-background hl-line-face))
-        `(bg-alt . ,(face-background 'default))
-        `(fg . ,(face-foreground 'default))
-        `(fg-alt . ,(face-foreground font-lock-comment-face))
-        `(red . ,(face-foreground 'error))
-        `(orange . ,(face-foreground 'warning))
-        `(yellow . ,(face-foreground font-lock-builtin-face))
-        `(green . ,(face-foreground 'success))
-        `(cyan . ,(face-foreground font-lock-constant-face))
-        `(blue . ,(face-foreground font-lock-keyword-face))
-        `(violet . ,(face-foreground font-lock-constant-face))
-        `(magenta . ,(face-foreground font-lock-preprocessor-face))))
-
-(defun org-roam-ui-find-subdirectories ()
-  "Find all the subdirectories in the org-roam directory.
-TODO: Exclude org-attach dirs."
-   (seq-filter
-    (lambda (file) (and (file-directory-p file) (org-roam-ui-allowed-directory-p file)))
-    (directory-files-recursively org-roam-ui-directory
-                                 ".*" t #'org-roam-ui-allowed-directory-p)))
-
-(defun org-roam-ui-allowed-directory-p (dir)
-  "Check whether a DIR should be listed as a filterable dir.
-Hides . directories."
-  (not (string-match-p "\\(\/\\|\\\\\\)\\..*?"  dir)))
-
-;;;; interactive commands
-
-;;;###autoload
-(defun org-roam-ui-open ()
-  "Ensure `org-roam-ui' is running, then open the `org-roam-ui' webpage."
-  (interactive)
-  (unless org-roam-ui-mode (org-roam-ui-mode))
-  (funcall org-roam-ui-browser-function
-           (format "http://localhost:%d" org-roam-ui-port)))
-
-;;;###autoload
-(defun org-roam-ui-node-zoom (&optional id speed padding)
-  "Move the view of the graph to current node.
-or optionally a node of your choosing.
-Optionally takes three arguments:
-The ID of the node you want to travel to.
-The SPEED in ms it takes to make the transition.
-The PADDING around the nodes in the viewport."
-  (interactive)
-  (if-let ((node (or id (org-gnosis-get-id))))
-      (websocket-send-text org-roam-ui-ws-socket
-                           (json-encode `((type . "command")
-                                          (data . ((commandName . "zoom")
-                                                   (id . ,node)
-                                                   (speed . ,speed)
-                                                   (padding . ,padding))))))
-    (message "No node found.")))
-
-
-;;;###autoload
-(defun org-roam-ui-node-local (&optional id speed padding)
-  "Open the local graph view of the current node.
-Optionally with ID (string), SPEED (number, ms) and PADDING (number, px)."
-  (interactive)
-  (if-let ((node (or id (org-gnosis-get-id))))
-      (websocket-send-text org-roam-ui-ws-socket
-                           (json-encode `((type . "command")
-                                          (data . ((commandName . "local")
-                                                   (id . ,node)
-                                                   (speed . ,speed)
-                                                   (padding . ,padding))))))
-    (message "No node found.")))
-
-
-(defun org-roam-ui-change-local-graph (&optional id manipulation)
-  "Add or remove current node to the local graph. If not in local mode, open local-graph for this node."  
-  (interactive)
-  (if-let ((node (or id (org-gnosis-get-id))))
-      (websocket-send-text org-roam-ui-ws-socket
-                           (json-encode `((type . "command")
-                                          (data . ((commandName . "change-local-graph")
-                                                   (id . ,node)
-                                                   (manipulation . ,(or manipulation "add")))))))
-    (message "No node found.")))
-
-;;;###autoload
-(defun org-roam-ui-add-to-local-graph (&optional id)
-  "Add current node to the local graph. If not in local mode, open local-graph for this node."
-  (interactive)
-  (org-roam-ui-change-local-graph id "add"))
-
-;;;###autoload
-(defun org-roam-ui-remove-from-local-graph (&optional id)
-  "Remove current node from the local graph. If not in local mode, open local-graph for this node."
-  (interactive)
-  (org-roam-ui-change-local-graph id "remove"))
-
-;;;###autoload
-(defun org-roam-ui-sync-theme ()
-  "Sync your current Emacs theme with org-roam-ui."
-  (interactive)
-  (websocket-send-text org-roam-ui-ws-socket
-                       (json-encode `((type . "theme")
-                                      (data . ,(org-roam-ui--update-theme))))))
-
-;;; Obsolete commands
-(define-obsolete-function-alias #'orui-open #'org-roam-ui-open "0.1")
-(define-obsolete-function-alias #'orui-node-local #'org-roam-ui-node-local "0.1")
-(define-obsolete-function-alias #'orui-node-zoom #'org-roam-ui-node-zoom "0.1")
-(define-obsolete-function-alias #'orui-sync-theme #'org-roam-ui-sync-theme "0.1")
-
-;;;###autoload
-(define-minor-mode org-roam-ui-follow-mode
-  "Set whether ORUI should follow your every move in Emacs."
-  :lighter " org-roam-ui"
-  :global t
-  :group 'org-roam-ui
-  :init-value nil
-  (if org-roam-ui-follow-mode
-      (progn
-        (add-hook 'post-command-hook #'org-roam-ui--update-current-node)
-        (message "org-roam-ui will now follow you around."))
-    (remove-hook 'post-command-hook #'org-roam-ui--update-current-node)
-    (message "org-roam-ui will now leave you alone.")))
-
-(provide 'org-roam-ui)
-;;; org-roam-ui.el ends here