diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 90 |
1 files changed, 88 insertions, 2 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 5b74cb773a..223d1d3a3d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19,7 +19,7 @@ ;;; Copyright © 2019 Nicolò Balzarotti <[email protected]> ;;; Copyright © 2019, 2020, 2021, 2022 Wiktor Żelazny <[email protected]> ;;; Copyright © 2019 Arne Babenhauserheide <[email protected]> -;;; Copyright © 2019, 2020 Efraim Flashner <[email protected]> +;;; Copyright © 2019, 2020, 2023 Efraim Flashner <[email protected]> ;;; Copyright © 2020 Todor Kondić <[email protected]> ;;; Copyright © 2020 Danjela Lura <[email protected]> ;;; Copyright © 2020 Naga Malleswari <[email protected]> @@ -3433,6 +3433,40 @@ model fitting and error handling.") into a pipeline of data manipulation and visualisation.") (license license:gpl3))) +(define-public r-morpho + (package + (name "r-morpho") + (version "2.11") + (source (origin + (method url-fetch) + (uri (cran-uri "Morpho" version)) + (sha256 + (base32 + "1c69n9284chygd375gkir4nk5bjglamhfyk2lz4z3kzy3z25qw50")))) + (properties `((upstream-name . "Morpho"))) + (build-system r-build-system) + (propagated-inputs (list r-bezier + r-colorramps + r-doparallel + r-foreach + r-jsonlite + r-mass + r-matrix + r-rcpp + r-rcpparmadillo + r-rgl + r-rvcg + r-sf)) + (home-page "https://github.com/zarquon42b/Morpho") + (synopsis + "Calculations and visualizations related to geometric morphometrics") + (description + "This package provides a toolset for Geometric Morphometrics and mesh +processing. This includes (among other stuff) mesh deformations based on +reference points, permutation tests, detection of outliers, processing of +sliding semi-landmarks and semi-automated surface landmark placement.") + (license license:gpl2))) + (define-public r-hgnchelper (package (name "r-hgnchelper") @@ -8631,6 +8665,29 @@ converted into other popular R objects. This package provides a link between VCF data and familiar R software.") (license license:gpl3))) +(define-public r-rvcg + (package + (name "r-rvcg") + (version "0.22.1") + (source (origin + (method url-fetch) + (uri (cran-uri "Rvcg" version)) + (sha256 + (base32 + "16rr2kqw7lqb7m01pwn496zf2nr25gm6wcncz44kszjzzmv2xanv")))) + (properties `((upstream-name . "Rvcg"))) + (build-system r-build-system) + (propagated-inputs (list r-rcpp r-rcpparmadillo r-rcppeigen)) + (home-page "https://github.com/zarquon42b/Rvcg") + (synopsis "Manipulations of triangular meshes based on the VCGLIB API") + (description + "This is a package for operations on triangular meshes based on VCGLIB. +This package integrates nicely with the R-package rgl to render the meshes +processed by Rvcg. The Visualization and Computer Graphics Library (VCG for +short) is a library for manipulation, processing and displaying with OpenGL of +triangle and tetrahedral meshes.") + (license license:gpl2+))) + (define-public r-ica (package (name "r-ica") @@ -14595,6 +14652,35 @@ based on entropy estimates from k-nearest neighbors distances and algorithms for the reconstruction of gene regulatory networks.") (license license:agpl3+))) +(define-public r-partr2 + (package + (name "r-partr2") + (version "0.9.1") + (source (origin + (method url-fetch) + (uri (cran-uri "partR2" version)) + (sha256 + (base32 + "06ky0hhrq0mcsn9rwrzvwn0rrjj0l8rxs0hqp10668gdq5hjk8bn")))) + (properties `((upstream-name . "partR2"))) + (build-system r-build-system) + (propagated-inputs (list r-dplyr + r-ggplot2 + r-lme4 + r-magrittr + r-pbapply + r-purrr + r-rlang + r-tibble + r-tidyr)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/mastoffel/partR2") + (synopsis "Partitioning R2 in generalized linear mixed models") + (description + "This package provides an R tool for estimating and partitioning R2 in +@dfn{generalized linear mixed models} (GLMMs) based on predictor variance.") + (license license:gpl2+))) + (define-public r-pscl (package (name "r-pscl") @@ -29314,7 +29400,7 @@ automatically show a loader when the output is (re)calculating.") (properties `((upstream-name . "rsvg"))) (build-system r-build-system) (inputs - (list librsvg zlib)) + (list (librsvg-for-system) zlib)) (native-inputs (list pkg-config r-knitr)) (home-page "https://github.com/jeroen/rsvg#readme") |