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2024-01-22gnu: notmuch: Update to 0.38.2.Nicolas Goaziou
* gnu/packages/mail.scm (notmuch): Update to 0.38.2. * gnu/packages/patches/notmuch-emacs-test-output.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Apply file deletion. Change-Id: I60d0487f2258ed5ef8602de7a624686c5f012a4f
2024-01-21gnu: converseen: Update to 0.12.0.2.Nicolas Goaziou
* gnu/packages/image.scm (converseen): Update to 0.12.0.2. [arguments]<#:configure-flags>: Use Qt6. [native-inputs, inputs]: Use Qt6. * gnu/packages/patches/converseen-hide-non-free-pointers.patch: Update patch. Change-Id: I6b6dc200b1b98115400854b2ff77cc805df45078
2024-01-19gnu: emacs-shx: Fix test failure.Maxim Cournoyer
* gnu/packages/patches/emacs-shx-byte-compilation-test.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/emacs-xyz.scm (emacs-shx): Apply it. Change-Id: I6d8edd3b50f99f1c4cd495216caf9648dfee4ea3
2024-01-18gnu: u-boot: Update to 2024.01.Herman Rimm
* gnu/packages/bootloaders.scm (u-boot): Update to 2024.01. [source]: Remove patman patch, add build-without-libcrypto patch. * gnu/packages/patches/u-boot-allow-disabling-openssl.patch: Remove upstreamed diffs. * gnu/packages/patches/u-boot-build-without-libcrypto.patch: Add file. * gnu/packages/patches/u-boot-patman-change-id.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Add patch, remove patch. Change-Id: I5a21d4cd645449ff669f17cdabe5313870bec46f Signed-off-by: Vagrant Cascadian <[email protected]>
2024-01-16gnu: python-pyls-black: Fix build.Ricardo Wurmus
* gnu/packages/patches/python-pyls-black-41.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python-xyz.scm (python-pyls-black)[source]: Add patch. [build-system]: Use pyproject-build-system. [arguments]: Disable one failing test. Change-Id: I14b2982644e58c0b43d76838febc6dfceb220b15
2024-01-16gnu: python-scikit-bio: Update to 0.5.9.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-scikit-bio): Update to 0.5.9. [source]: Add patch. [arguments]: Disable one test via #:test-flags; adjust 'compatibility phase; update 'check phase. [propagated-inputs]: Remove python-cachecontrol, python-lockfile, and python-scikit-learn; add python-requests. * gnu/packages/patches/python-scikit-bio-1887.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: Ie57b0256cf695e5ea088545cd2102335303a93e7
2024-01-14gnu: openssh: Fix build on ppc64le.Jack Hill
* gnu/packages/ssh.scm (openssh)[source]: Use 'openssh-gcc-13-ppc64le-fzero-call-used-regs.patch'. * gnu/packages/patches/openssh-gcc-13-ppc64le-fzero-call-used-regs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Reported-by: Marcel van der Boom <[email protected]>. Change-Id: I41b1350b2cdd1487a8fd69b13b64f63c0dc166c9 Signed-off-by: Ludovic Courtès <[email protected]>
2024-01-14Merge branch 'master' into gnome-teamLiliana Marie Prikler
2024-01-14gnu: unknown-horizons: Fix build and runtime errors.Simon South
Apply two upstream commits that allow building with Python 3.9 or newer and running with Python 3.10. * gnu/packages/patches/unknown-horizons-python-3.9.patch: New file. * gnu/packages/patches/unknown-horizons-python-3.10.patch: New file. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/games.scm (unknown-horizons)[source]: Apply them. Change-Id: Icbc8b698b913be01465b09ab26afb29e5fd62a87 Signed-off-by: Liliana Marie Prikler <[email protected]> Fixes: Unknown Horizons fails to start <https://bugs.gnu.org/54815>
2024-01-14gnu: fifengine: Fix runtime error when using Python 3.9 or newer.Simon South
* gnu/packages/patches/fifengine-python-3.9-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/games.scm (fifengine)[source]: Apply it. Change-Id: I61001d6b87db00c71f1e2e6ca3bac8581e941451 Signed-off-by: Liliana Marie Prikler <[email protected]>
2024-01-11Merge branch 'lisp-team'Guillaume Le Vaillant
Change-Id: I4ec6ad695392c76c389224255477819fa686eecb
2024-01-10gnu: sbcl: Fix riscv build.Guillaume Le Vaillant
* gnu/packages/patches/sbcl-fix-riscv-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/lisp.scm (sbcl)[source]: Use it. Change-Id: I63f1b9a7a7b6f3a1961d0a0cb31189b74a60abc3
2024-01-10gnu: openjdk10: Fix time bomb in ‘GenerateCurrencyData.java’.Ricardo Wurmus
Fixes <https://issues.guix.gnu.org/68333>, as well. This is a companion to commit 5c0f77f4241c9beac0c82deae946bfdc70b49ff0. * gnu/packages/java.scm (openjdk10)[source]: Add patch. * gnu/packages/patches/openjdk-currency-time-bomb2.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I42fc14d305883f672cd6764a0ee6462852e41a5b
2024-01-10gnu: openjdk9: Fix time bomb in ‘GenerateCurrencyData.java’.Ricardo Wurmus
Fixes <https://issues.guix.gnu.org/68333>, as well. This is a companion to commit 5c0f77f4241c9beac0c82deae946bfdc70b49ff0. * gnu/packages/java.scm (openjdk9)[source]: Add patch. * gnu/packages/patches/openjdk-currency-time-bomb.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I45ca1fe5bad922307eba64d46a330a8f233c0f55
2024-01-10gnu: icedtea: Fix time bomb in ‘GenerateCurrencyData.java’.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/68333>. * gnu/packages/java.scm (icedtea-7)[drop]: Add optional ‘patches’ parameter and honor it. [native-inputs]: Add patch for “jdk-drop”. (icedtea-8): Likewise. * gnu/packages/patches/jdk-currency-time-bomb.patch, gnu/packages/patches/jdk-currency-time-bomb2.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. Change-Id: I3b4cf562ce4bedb87ce0e7c289e431fbb0dbb6f8
2024-01-10Merge branch 'master' into lisp-teamGuillaume Le Vaillant
Change-Id: I6c2ce53e782a00861c3adf01c2505099daef7728
2024-01-09gnu: jami: Update to 20231222.2.Maxim Cournoyer
* gnu/packages/jami.scm (%jami-version): Rename to... (%jami-nightly-version): ... this. Update to 20231222.2. (%jami-daemon-commit): New variable. (%jami-sources): Delete variable. (libjami) Adjust source to use %jami-nightly-version, %jami-daemon-commit. [source]: Fetch from git. Apply libjami-ac-config-files.patch. [arguments] <make-flags>: Skip ut_media_player test. <phases>: Add extend-scheduler-test-timeout and extend-scheduler-test-timeout phases. [inputs]: Replace dbus-c++ with sdbus-c++. Add dhtnet. Replace libgit2 with libgit2-1.6. (jami): Set version to %jami-nightly-version. [source]: Fetch from git. Apply new jami-qml-tests-discovery.patch, jami-skip-tests-requiring-internet.patch and jami-unbundle-dependencies.patch patches. [arguments] <configure-flags>: Add -DWITH_DAEMON_SUBMODULE=OFF. <phases>: Delete change-directory/maybe. Adjust check phase. Add fake-x11-environment, copy-3rdparty-source-dependencies and disable-problematic-tests phases. [inputs]: Add md4c and tidy-html. * gnu/packages/patches/jami-qml-tests-discovery.patch: New file. * gnu/packages/patches/libjami-ac-config-files.patch: Likewise. * gnu/packages/patches/jami-skip-tests-requiring-internet.patch: Likewise. * gnu/packages/patches/jami-unbundle-dependencies.patch: Likewise. * gnu/packages/patches/jami-libjami-headers-search.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Update accordingly. * gnu/packages/patches/jami-disable-integration-tests.patch: Adjust patch. Series-changes: 2 - Update Jami to latest nightly version (20231222.2) Change-Id: If30f1178bdfa29c4ea3e54dbb7997e360788adae
2024-01-09gnu: ffmpeg-jami: Relocate to (gnu packages video).Maxim Cournoyer
To avoid Guile module dependency cycles, inherited packages must be defined in the same module. Use this opportunity to simplify the patches applying mechanism, versioning custom patches the same as for other packages. * gnu/packages/patches/ffmpeg-jami-change-RTCP-ratio.patch: New file. * gnu/packages/patches/ffmpeg-jami-rtp_ext_abs_send_time.patch: Likewise. * gnu/packages/patches/ffmpeg-jami-libopusdec-enable-FEC.patch: Likewise. * gnu/packages/patches/ffmpeg-jami-libopusenc-enable-FEC.patch: Likewise. * gnu/packages/patches/ffmpeg-jami-libopusenc-reload-packet-loss-at-encode.patch: Likewise. * gnu/packages/patches/ffmpeg-jami-remove-mjpeg-log.patch: Likewise. * gnu/packages/patches/ffmpeg-jami-screen-sharing-x11-fix.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Register them. * gnu/packages/jami.scm (jami-apply-custom-patches): Delete procedure. (%ffmpeg-default-configure-flags): Delete variable. (ffmpeg-compose-configure-flags): Delete procedure. (ffmpeg-jami): Move to... * gnu/packages/video.scm (ffmpeg-jami): ... here. Apply patches to origin and repatriate configure flags. Change-Id: Id374fae18240cd76b224915d80b61422635ccb77
2024-01-09gnu: Add python-pyreadstat.Troy Figiel
* gnu/packages/patches/python-pyreadstat-link-libiconv.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/statistics.scm (python-pyreadstat): New variable. Signed-off-by: Mathieu Othacehe <[email protected]> Change-Id: I361df91487412e4bfd26fb728a6999752e6343e5
2024-01-09gnu: sbcl: Fix build on powerpc64.Guillaume Le Vaillant
* gnu/packages/patches/sbcl-fix-ppc64-build.patch: New file. * gnu/local.mk: Register it. * gnu/packages/lisp.scm (sbcl)[source]: Use it. Change-Id: If81321bc7e4075ac7ec63f7b8d623011b4b975d5
2024-01-08gnu: guile-fibers: Apply upstream patch fixing libevent timers.Ludovic Courtès
* gnu/packages/patches/guile-fibers-libevent-timeout.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/guile-xyz.scm (guile-fibers)[source]: Use it. Change-Id: I872ffe5b193087234d29eed399d6db518c5af4d5
2024-01-07Merge branch 'master' into mesa-updatesJohn Kehayias
Change-Id: I0b92a95109688a1a4c50572bc25a4e5676e0921e
2024-01-07gnu: dtc: Update to 1.7.0.Mathieu Othacehe
Enable the python bindings and switch to the meson build system that handles the python bindings better than the Makefile build system here. * gnu/packages/patches/dtc-meson-cell-overflow.patch: New file * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bootloaders.scm (dtc): Update to 1.7.0. [build-system]: Switch to the meson-build-system. [arguments]: Remove #:make-flags. Add a new 'preparations phase. Do not edit the Makefile in the 'patch-pkg-config phase. Remove the 'configure phase. Change-Id: Ie61c920829ab3a8c32f4924c694dba6bda807711 Signed-off-by: Mathieu Othacehe <[email protected]>
2024-01-07Merge branch 'master' into gnome-teamLiliana Marie Prikler
2024-01-07gnu: python-uqbar: Update to 0.5.9.Troy Figiel
* gnu/packages/graphviz.scm (python-uqbar): Update to 0.5.9. [source]: Add patch for Python 3.10 compatibility. [arguments]: Remove outdated patch phase. Change-Id: I81d83efd69bd07fe12790981c48a6e82297908f0 Signed-off-by: Ludovic Courtès <[email protected]>
2024-01-04gnu: emacs-ess: Update to 18.10.2-1.3691ecc.Nicolas Goaziou
* gnu/packages/statistics.scm (emacs-ess): Update to 18.10.2-1.3691ecc. [arguments]: Skip failing tests. * gnu/packages/patches/emacs-ess-fix-obsolete-function-alias.patch: Delete file. * gnu/local.mk: Apply file removal. Change-Id: If8cd54c32c44cd2465f2cdb78317e8f8339f6bc3
2024-01-04Merge branch 'master' into mesa-updatesJohn Kehayias
Change-Id: I46ca25bea98d25150877421c6d5161752afabb25
2024-01-02gnu: emacs-haskell-mode: Update to 17.5.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-haskell-mode): Update to 17.5. * gnu/packages/patches/emacs-haskell-mode-no-redefine-builtin.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Apply file deletion. Change-Id: Ic7d11737af87995610ecf2c3178320901991423d
2024-01-01Merge branch 'master' into gnome-teamLiliana Marie Prikler
2024-01-01gnu: python-pytorch-for-r-torch: Update to 2.0.1.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Update to 2.0.1. * gnu/packages/patches/python-pytorch2-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I97551d543e50f6e511aa0529c097d156cf3f96de
2024-01-01gnu: Add onnx-for-torch2.Ricardo Wurmus
* gnu/packages/machine-learning.scm (onnx-for-torch2): New variable. * gnu/packages/patches/onnx-1.13.1-use-system-googletest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I8a46b9a8096a33bcf949bc4f5d497e22902ab301
2024-01-01gnu: Add xnnpack-for-torch2.Ricardo Wurmus
* gnu/packages/machine-learning.scm (xnnpack-for-torch2): New variable. * gnu/packages/patches/xnnpack-for-torch2-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I1c35f5fbd064fcc6732b924d7cafaa1a7d03ce04
2023-12-29gnu: Transmission: Update to 4.0.5.Leo Famulari
* gnu/packages/bittorrent.scm (transmission): Update to 4.0.5. [source]: Use 'transmission-4.0.5-fix-build.patch'. * gnu/packages/patches/transmission-4.0.5-fix-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I8e9486dca07f01628e7886e7ac5757d511056cb7
2023-12-28Merge branch 'master' into mesa-updatesJohn Kehayias
Change-Id: I16539f64df739453a83f8dfd962e04910a7d7ff5
2023-12-23gnu: slim: Update to 1.4.0.Feng Shu
* gnu/packages/display-managers.scm (slim)[version]: Update to 1.4.0. [inputs]: Remove input label. [arguments]: Use gexp and remove fix-0-pointer-comparison. [home-pages]: Update to slim-fork's url. * gnu/packages/patches/slim-config.patch: Port to slim-1.4.0. * gnu/packages/patches/slim-display.patch: Port to slim-1.4.0. * gnu/packages/patches/slim-reset.patch: Deleted, no ablilty to port this patch for big change in v1.4.0. * gnu/packages/patches/slim-session.patch: Deleted. seem to work without this patch, further observation is needed. * gnu/packages/patches/slim-sigusr1.patch: Deleted, fixed in upstream. * gnu/local.mk: Remove slim-reset.patch, slim-session.patch, slim-sigur1.patch. Signed-off-by: Ludovic Courtès <[email protected]>
2023-12-22gnu: u-boot: Update to 2023.10.Herman Rimm
* gnu/local.mk: De-register patches. * gnu/packages/bootloaders.scm (u-boot): Update to 2023.10. [source]: Remove patches. (u-boot-documentation)[inputs]: Add python-sphinx-prompt. * gnu/packages/patches/u-boot-allow-disabling-openssl.patch: Refresh. * gnu/packages/patches/u-boot-fix-build-python-3.10.patch: Delete file. * gnu/packages/patches/u-boot-fix-u-boot-lib-build.patch: Delete file. * gnu/packages/patches/u-boot-rk3399-enable-emmc-phy.patch: Delete file. * gnu/packages/patches/u-boot-rockchip-inno-usb.patch: Refresh. * gnu/packages/patches/u-boot-sifive-prevent-reloc-initrd-fdt.patch: Delete file. Modifed-by: Vagrant Cascadian <[email protected]> Signed-off-by: Vagrant Cascadian <[email protected]>
2023-12-22gnu: accountsservice: Update to 23.13.9.Vivien Kraus
* gnu/packages/freedesktop.scm (accountsservice): Update to 23.13.9. [native-inuputs]: Add glibc-locales. * gnu/packages/patches/accountsservice-extensions.patch: Adjust to changes in the upstream code style. Change-Id: I19678b5ce36549a832099109b13cdaf91539b20a Signed-off-by: Liliana Marie Prikler <[email protected]>
2023-12-21Merge branch 'master' into mesa-updatesJohn Kehayias
Change-Id: Icf1dd47b3e0780d16887014bdacb0dbc891bfec5
2023-12-20Merge branch 'master' into gnome-teamLiliana Marie Prikler
2023-12-19gnu: mm-common: Update to 1.0.5.Vivien Kraus
* gnu/packages/gnome.scm (mm-common): Update to 1.0.5. [arguments]: Convert to list of G-Expressions. [native-inputs]: Drop labels. [source]: Remove mm-common-reproducible-tarball.patch. * gnu/local.mk (dist_patch_DATA): Unregister it. * gnu/packages/patches/mm-common-reproducible-tarball.patch: Delete. Change-Id: If7331e87949bf9e94348757d46a9a3a0459608f0 Signed-off-by: Liliana Marie Prikler <[email protected]>
2023-12-19gnu: glib-networking: Update to 2.76.1.Vivien Kraus
* gnu/packages/gnome.scm (glib-networking): Update to 2.76.1. [patches]: Remove. [native-inputs]: Add glib-bin. * gnu/packages/patches/glib-networking-gnutls-binding.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister it. Change-Id: I1c7249995d07d975ac3d3df8ce1e07ffa4dc240f Signed-off-by: Liliana Marie Prikler <[email protected]>
2023-12-18gnu: freeimage: Patch 2 CVEs.Efraim Flashner
* gnu/packages/image.scm (freeimage)[source]: Add patches. * gnu/packages/patches/freeimage-CVE-2020-21428.patch, gnu/packages/patches/freeimage-CVE-2020-22524.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them. Change-Id: Iec114f2295cafbc8b55e81c0d8e4a361fd653152
2023-12-17gnu: curl: Update to 8.5.0 [security fixes].John Kehayias
Fixes CVE-2023-46218 and CVE-2023-46219. See <https://curl.se/docs/CVE-2023-46218.html> and <https://curl.se/docs/CVE-2023-46219.html> respectively. * gnu/packages/curl.scm (curl): Update to 8.5.0. * gnu/packages/patches/curl-use-ssl-cert-env.patch: Update patch. Change-Id: Iaa6aa5de0f45576dc06bf5eca1eec502e5c83332
2023-12-22gnu: dante: Enable preloading support.Nguyễn Gia Phong
Fixes <https://issues.guix.gnu.org/63250>. Dante uses dlopen which doesn't work with libc.so but libc.so.6. This fixes socksify, which is patched to skip invoking uname needlessly. * gnu/packages/networking.scm (dante): Enable preloading support. * gnu/packages/patches/dante-non-darwin.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. References: https://github.com/NixOS/nixpkgs/pull/68418#discussion_r343625853 Change-Id: I03a5b6b6e11cf6a0453a4968ff00c6dd627249a8 Signed-off-by: Ludovic Courtès <[email protected]>
2023-12-16gnu: fpc: Fix building on i686-linux.Efraim Flashner
* gnu/packages/pascal.scm (fpc)[source]: Add patch. * gnu/packages/patches/fpc-glibc-2.34-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Change-Id: I6fde62de63171d7e16754b36db460f4073b1979d
2023-12-04gnu: mutter: Update to 44.7.Vivien Kraus
* gnu/packages/gnome.scm (mutter): Update to 44.7. [propagated-inputs]: Remove gtk+. Update comment. [source]: Remove patches. * gnu/local.mk (dist_patch_DATA): Unregister mutter-fix-inverted-test.patch. * gnu/packages/patches/mutter-fix-inverted-test.patch: Remove. Change-Id: Ibe2f578409c7e0bd3cd902525638be2dec124094 Signed-off-by: Liliana Marie Prikler <[email protected]>
2023-12-03Merge branch 'master' into HEADLiliana Marie Prikler
Change-Id: I3f5d121162d98ef2ae61a62c4da3b0fd19d864e8
2023-12-02gnu: igraph: Update to 0.10.7.David Elsing
* gnu/packages/graph.scm (igraph): Update to 0.10.7. [source]: Use git-fetch. Apply patch. <snippet>: Remove the entire "vendor" and "src/isomorphism/bliss" directories. Patch CMakeLists.txt to not build and use vendored dependencies. [arguments]: Add -DIGRAPH_INTEGER_SIZE=64 to #:configure-flags. Add phases to use unbundled libraries and build documentation. [native-inputs]: Add bison, docbook-xml-4.3, docbook-xsl, flex, pcg-c, python, source-highlight and xmlto. [inputs]: Remove gmp and libxml2. Add bliss and suitesparse-cxsparse. * gnu/packages/patches/igraph-fix-varargs-integer-size.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Ludovic Courtès <[email protected]>
2023-12-02gnu: python-sphinx-prompt: Fix tests.Lars-Dominik Braun
docutils>=0.19 broke the tests, which upstream fixed in a newer commit. Cherry-pick it. * gnu/packages/patches/python-sphinx-prompt-docutils-0.19.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/sphinx.scm (python-sphinx-prompt)[origin]: Use it. Change-Id: I597387a35e6a1da01063b4812e0f919788a13b54
2023-11-30gnu: Add plasp.Liliana Marie Prikler
* gnu/packages/patches/plasp-fix-normalization.patch: New file. * gnu/packages/patches/plasp-include-iostream.patch: New file. * gnu/local.mk (dist_patch_DATA): Register them here. * gnu/packages/potassoc.scm (plasp): New variable. Change-Id: I0d8d64153b180a7d1d8d81888f843458efdf5e51
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