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2021-12-09gnu: metabat: Update to 2.15.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (metabat): Update to 2.15. [source]: Remove patch. [build-system]: Use cmake-build-system. [arguments]: Adjust to new build system. * gnu/packages/patches/metabat-fix-compilation.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-12-08gnu: geeqie: Fix X11 error at startup.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/52089>. Reported by Maxim Cournoyer <[email protected]>. Patch provided by John Kehayias <[email protected]>. * gnu/packages/patches/geeqie-clutter.patch: New file. * gnu/packages/image-viewers.scm (geeqie)[sources]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2021-12-06gnu: helm: Fix build with GCC 9 and later.Pierre Langlois
* gnu/packages/music.scm (helm)[origin]: Add patch. * gnu/packages/patches/helm-fix-gcc-9-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2021-12-05Merge remote-tracking branch 'origin/master' into core-updates-frozenRicardo Wurmus
2021-12-04gnu: libunwind-julia: Fix build on i686-linux.zimoun
* gnu/packages/julia.scm (libunwind)[origin]<patches>: Add patch. * gnu/packages/patches/libunwind-julia-fix-GCC10-fno-common.patch: New file. * gnu/local/mk (dist_patch_DATA): Register it. Signed-off-by: Efraim Flashner <[email protected]>
2021-12-03gnu: icecat: Remove vestigial icecat-78-makeicecat.patch.Mark H Weaver
This is a followup to commit a63231003e7bbeafb0110b077788e47e78685f20. * gnu/packages/patches/icecat-78-makeicecat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-12-03gnu: icecat: Fix CVE-2021-43527.Mark H Weaver
* gnu/packages/patches/icecat-CVE-2021-43527.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnuzilla.scm (icecat-source): Apply it.
2021-12-03gnu: nss: Fix CVE-2021-43527 via graft.Mark H Weaver
* gnu/packages/patches/nss-CVE-2021-43527.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/nss.scm (nss/fixed): New variable (nss)[replacement]: New field.
2021-12-01gnu: scalapack: Update to 2.1.0.Ludovic Courtès
* gnu/packages/maths.scm (scalapack): Update to 2.1.0. [source]: Remove "scalapack-blacs-mpi-deprecations.patch" and add "scalapack-gcc-10-compilation.patch". [arguments]: Add 'skip-faulty-test' phase. * gnu/packages/patches/scalapack-blacs-mpi-deprecations.patch: Remove. * gnu/packages/patches/scalapack-gcc-10-compilation.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-12-01gnu: Update Trezor support.Attila Lendvai
* gnu/packages/patches/python-trezor-agent-fix-argv0.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Apply previous removal. * gnu/packages/finance.scm (python-trezor-agent): Update to 0.14.4. [source]: Remove now useless patch. (python-mnemonic): Update to 0.20. (python-trezor): Update to 0.12.4 (trezor-agent): Update to 0.11.0-1. [source]: Add file-name field. [arguments]: Remove trailing #T in phases. Signed-off-by: Nicolas Goaziou <[email protected]>
2021-12-01gnu: yggdrasil: Update to 0.4.1.raingloom
* gnu/packages/networking.scm (yggdrasil): Update to 0.4.1. * gnu/packages/patches/yggdrasil-extra-config.patch: Update for new version. Signed-off-by: Ricardo Wurmus <[email protected]>
2021-12-01gnu: yggdrasil: Update to 0.4.0.raingloom
* gnu/packages/patches/yggdrasil-extra-config.patch: Update patch. * gnu/packages/networking.scm (yggdrasil): Update to 0.4.0. [arguments]: Also install genkeys. [propagated-inputs]: Remove go-github-com-cheggaaa-pb; add go-golang-org-x-sys, go-github-com-mattn-go-runewidth, go-github-com-mattn-go-isatty, go-github-com-fatih-color, go-github-com-cheggaaa-pb-v3, go-github-com-vividcortex-ewma, and go-github-com-arceliar-ironwood. Signed-off-by: Ricardo Wurmus <[email protected]>
2021-12-01gnu: Add dynaconf.Giacomo Leidi
* gnu/packages/python-xyz.scm (dynaconf): New variable. * gnu/packages/patches/dynaconf-Unvendor-dependencies.patch: New file. * local.mk (dist_patch_DATA): Register it. Signed-off-by: Efraim Flashner <[email protected]>
2021-11-30gnu: freecad: Fix build.Mathieu Othacehe
* gnu/packages/patches/freecad-boost-serialization.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/engineering.scm (freecad) [source]: Use it. [arguments]{#:configure-flags}: Turn it into a GEXP and adapt it.
2021-11-30gnu: freecad: Switch to vtk-9.Mathieu Othacehe
Switch to vtk-9 with the relevant patch to be able to get rid of vtk-8. * gnu/packages/patches/freecad-vtk9.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/engineering.scm (freecad)[source]: Use it.
2021-11-30gnu: coq: Update to 8.14.0.Julien Lepiller
* gnu/packages/coq.scm (coq): Update to 8.14.0. (coq-bignums): Update to 8.14.0. (coq-equations): Update to 1.3. * gnu/packages/patches/coq-fix-envvars.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-11-29gnu: agg: Fix build.Mathieu Othacehe
* gnu/packages/patches/agg-2.5-gcc8.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/graphics.scm (agg)[source]: Use it.
2021-11-28gnu: python-trezor-agent: Fix key generation with trezor-gpg initAttila Lendvai
* gnu/packages/finance.scm (trezor-agent): Add comment on why the undoing of the wrapping is done, and also delete the irrelevant sideffect of the now undone wrapping. (python-trezor-agent): Add a patch that changes the python code to handle the argv[0] changed by the wrapping. * gnu/packages/patches/trezor-agent-fix-argv0.patch: New file. * gnu/local.mk (dist_patch_DATA): Reference patch. Signed-off-by: Nicolas Goaziou <[email protected]>
2021-11-27gnu: u-boot: Fix rk3399 boot from emmc.Pierre Langlois
* gnu/packages/bootloaders.scm (%u-boot-rk3399-enable-emmc-phy-patch): New variable. (u-boot)[origin]: Register it. * gnu/packages/patches/u-boot-rk3399-enable-emmc-phy.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-11-27gnu: gnome-boxes: Add Guix logo support.Mathieu Othacehe
* gnu/packages/patches/gnome-boxes-add-guix-logo.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (gnome-boxes): Use it.
2021-11-27gnu: julia: Correctly test using '#:parallel-tests?'.zimoun
* gnu/packages/julia.scm (julia)[phases]{enable-parallel-tests}: Use PARALLEL-TESTS?, not PARALLEL-BUILD?. Remove comment. * gnu/packages/patches/julia-allow-parallel-build.patch: Move explanatory comment to the top of the patch. Modified-by: Maxim Cournoyer <[email protected]> Signed-off-by: Maxim Cournoyer <[email protected]>
2021-11-26gnu: tor: Address glibc 2.33 compatibility issue on i686.Ludovic Courtès
* gnu/packages/patches/tor-sandbox-i686.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/tor.scm (tor): Use it.
2021-11-26gnu: pitivi: Fix build with Meson 0.60.Leo Famulari
* gnu/packages/patches/pitivi-fix-build-with-meson-0.60.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/video.scm (pitivi)[source]: Use it.
2021-11-25gnu: julia: Allow parallel tests.zimoun
* gnu/packages/julia.scm (julia)[origin]<patches>: New patch. * gnu/packages/patches/julia-allow-parallel-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Maxim Cournoyer <[email protected]>
2021-11-24gnu: racket: Update to 8.3.jgart
* gnu/packages/racket.scm (racket-minimal, racket): Update to 8.3. * gnu/packages/racket.scm (racket-minimal)[source]: Remove racket-minimal-backport-1629887.patch from patches. * gnu/packages/patches/racket-minimal-backport-1629887.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it. Signed-off-by: Arun Isaac <[email protected]>
2021-11-24gnu: glib-networking: Work around test failure on 32-bit platforms.Ludovic Courtès
On 32-bit platforms with a 32-bit 'time_t', we'd get this test failure: GLib-Net:ERROR:../glib-networking-2.70.rc/tls/tests/certificate.c:689:test_certificate_not_valid_after: assertion failed (actual_str == EXPECTED_NOT_VALID_AFTER): ("2037-12-31T23:23:23Z" == "2046-07-25T18:13:10Z") This commit includes the workaround implemented upstream. * gnu/packages/patches/glib-networking-32-bit-time.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (glib-networking)[arguments]: New field.
2021-11-24gnu: gdm: Pass GDK_PIXBUF_MODULE_FILE to sessions.Josselin Poiret
* gnu/packages/patches/gdm-pass-gdk-pixbuf-loader-env.patch: Add patch. * gnu/local.mk (dist_patch_DATA): List it. * gnu/packages/gnome.scm (gdm): Use it. * gnu/services/xorg.scm (gdm-shepherd-service): Pass GDK_PIXBUF_MODULE_FILE. Modified-by: Maxim Cournoyer <[email protected]> Signed-off-by: Maxim Cournoyer <[email protected]>
2021-11-23gnu: libgit2: Reintroduce 1.1.0.Ludovic Courtès
* gnu/packages/version-control.scm (libgit2-1.1): New variable. * gnu/packages/patches/libgit2-mtime-0.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-11-23Merge branch 'master' into core-updates-frozenLudovic Courtès
2021-11-22gnu: guile-git: Patch to support latest libgit2.Maxim Cournoyer
* gnu/packages/patches/guile-git-adjust-for-libgit2-1.2.0.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/guile.scm (guile-git)[source]: Use it.
2021-11-22gnu: libgit2: Update to 1.3.0.Maxim Cournoyer
* gnu/packages/patches/libgit2-mtime-0.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. * gnu/packages/version-control.scm (libgit2): Update to 1.3.0. [source]: Remove patch and simplify snippet. [phases]: Remove trailing #t.
2021-11-22gnu: transmission-remote-gtk: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/bittorrent.scm (transmission-remote-gtk): Update to 1.4.2. [source]: Remove patch. * gnu/packages/patches/transmission-remote-gtk-fix-appstream.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-11-22gnu: awesome: Fix build.Mathieu Othacehe
* gnu/packages/patches/awesome-4.3-fno-common.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/wm.scm (awesome)[source]: Use it. [arguments]{set-paths}: Set HOME and XDG_CACHE_HOME variables.
2021-11-22gnu: gdb: Build fix for the Hurd, part 2.Jan (janneke) Nieuwenhuizen
This is a follow-up to commit b1fd9531149b94a7e7cdabc67b08ea6a47b03d3d gnu: gdb: Build fix for the Hurd. * gnu/packages/patches/gdb-fix-gnu-nat-build.patch: Include two more patches.
2021-11-21gnu: network-manager: Build with Meson 0.60.Ludovic Courtès
This is another way to address <https://github.com/mesonbuild/meson/issues/9492> as suggested by Nirbheek Chauhan and Paolo Bonzini. * gnu/packages/patches/network-manager-meson.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (network-manager)[source]: Use it. [arguments]: Remove #:meson.
2021-11-21gnu: python-werkzeug: Reintroduce 1.0.1.Ludovic Courtès
* gnu/packages/python-web.scm (python-werkzeug-1.0): New variable. * gnu/packages/patches/python-werkzeug-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-11-21gnu: gdb: Build fix for the Hurd.Jan (janneke) Nieuwenhuizen
This allows (cross-)building gdb-minimal for the Hurd. * gnu/packages/patches/gdb-fix-gnu-nat-build.patch: New file, taken from upstream. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/web.scm (gdb)[inputs]: When building for the Hurd, add it. [arguments]: When building for the Hurd, apply it.
2021-11-21gnu: gnome-session: Restore elogind support.Timothy Sample
* gnu/packages/patches/gnome-session-support-elogind.patch: New file. * gnu/local.mk: Add it. * gnu/packages/gnome.scm (gnome-session)[source]: Use it. [arguments]: Add "-Delogind=true" to #:configure-flags; remove phases that patch in old-style elogind support. Signed-off-by: Maxim Cournoyer <[email protected]>
2021-11-21gnu: genimage: Update to 14-1.11bb044.Mathieu Othacehe
Update to commit 11bb04455 to integrate fixes related to new genext2fs and e2fsprogs versions. * gnu/packages/genimage.scm (genimage): Update to 14-1.11bb044. [arguments]{fix-failing-tests}: Update it. * gnu/packages/patches/genimage-mke2fs-test.patch: Update it.
2021-11-20gnu: ocaml-qcheck: Update to 0.18.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml-qcheck): Update to 0.18. * gnu/packages/patches/ocaml-qcheck-fix-test-whitespace.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-11-20gnu: ocaml-ppx-variants-conv: Update to 0.14.2.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml-ppx-variants-conv): Update to 0.14.2. [origin]: Remove patch. * gnu/packages/patches/ocaml-ppx-variants-ppxlib-api-change.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-11-20gnu: gnome-shell: Update to 41.0.Maxim Cournoyer
* gnu/packages/gnome.scm (gnome-shell): Update to 41.0. [origin]: Remove patches and modules fields. [phases]{pre-check}: Set HOME. * gnu/packages/patches/gnome-shell-disable-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it.
2021-11-19gnu: elogind: Revert changes to polkit build time detection.Josselin Poiret
* gnu/packages/patches/elogind-revert-polkit-detection.patch: New file. * gnu/packages/freedesktop.scm (elogind): Use it. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Timothy Sample <[email protected]>
2021-11-19gnu: geary: Upgrade to 40.0Vivien Kraus
* gnu/packages/gnome.scm (geary): Upgrade to 40.0. Signed-off-by: Ludovic Courtès <[email protected]>
2021-11-19gnu: polkit: Fix elogind configuration.Timothy Sample
* gnu/packages/patches/polkit-configure-elogind.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/polkit.scm (polkit): Use it.
2021-11-18gnu: Add shell2batch.Jacob Hrbek
* gnu/packages/crates-io.scm (shell2batch): New variable. * gnu/packages/patches/rust-shell2batch-lint-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Julien Lepiller <[email protected]>
2021-11-18gnu: xf86-video-nouveau: Use upstream patch for xorg-server 21.1.Josselin Poiret
* gnu/packages/patches/xf86-video-nouveau-fixup-ABI.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (xf86-video-nouveau): Use it. Signed-off-by: Timothy Sample <[email protected]>
2021-11-18gnu: xf86-video-mach64: Patch to build with xorg-server 21.1.Josselin Poiret
* gnu/packages/patches/xf86-video-mach64-bool-to-boolean.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (xf86-video-mach64): Use it. Signed-off-by: Timothy Sample <[email protected]>
2021-11-18gnu: strace: Allow readlink, readlinkat tests to pass.Simon South
Modify the invocation of strace's "readlink" and "readlinkat" tests to prevent them from failing due to an additional system call made by Guix's patched version of glibc. * gnu/packages/linux.scm (strace)[source]: Add patch. [arguments]<#:phases>: Do not disable the "readlink" test now that it can succeed. * gnu/packages/patches/strace-readlink-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <[email protected]>
2021-11-18gnu: gnome-screenshot: Fix build with Meson 0.60.0.Jack Hill
* gnu/packages/patches/gnome-screenshot-meson-0.60.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (gnome-screenshot)[patches]: New field. Signed-off-by: Ludovic Courtès <[email protected]>
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