diff options
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/python-science.scm | 133 |
1 files changed, 73 insertions, 60 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 1f4cdb239a..127e9e378a 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -3107,7 +3107,7 @@ aggregated sum and more.") (define-public python-plotnine (package (name "python-plotnine") - (version "0.10.1") + (version "0.14.5") (source (origin (method git-fetch) @@ -3116,7 +3116,7 @@ aggregated sum and more.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0lg53wcm00lj8zbb4q9yj4a0n0fqaqq7c7vj18bda0k56gg0fpwl")))) + (base32 "02ph0h312qn5a9ivh2qhv0x9sybccgbidzvb8im1hikwcqp8v2fw")))) (build-system pyproject-build-system) (arguments (list @@ -3124,64 +3124,77 @@ aggregated sum and more.") ;; XXX: Check for any new failing tests during next update cycle. ;; These all fail because the images are considered to be too different, ;; though they really do look fine. - '(list "-k" - (string-append "not TestThemes" - (string-join (list - ;; Image tests - "test_adjust_text" - "test_annotation_logticks_coord_flip_discrete" - "test_annotation_logticks_faceting" - "test_arrow" - "test_aslabeller_dict_0tag" - "test_caption_simple" - "test_continuous_x" - "test_continuous_x_fullrange" - "test_coord_trans_backtransforms" - "test_coord_trans_se_false" - "test_custom_shape" - "test_datetime_scale_limits" - "test_dir_v_ncol" - "test_discrete_x" - "test_discrete_x_fullrange" - "test_facet_grid_drop_false" - "test_facet_grid_expression" - "test_facet_grid_space_ratios" - "test_facet_wrap" - "test_facet_wrap_expression" - "test_facet_wrap_label_both" - "test_label_context_wrap2vars" - "test_labeller_cols_both_grid" - "test_labeller_cols_both_wrap" - "test_labeller_towords" - "test_missing_data_discrete_scale" - "test_ribbon_facetting" - "test_stack_non_linear_scale" - "test_uneven_num_of_lines" - - ;; This triggers an unexpected but harmless - ;; warning. - "test_save_method" - - ;; Missing optional modules - "test_non_linear_smooth" - "test_non_linear_smooth_no_ci") - " and not " - 'prefix))) - #:phases '(modify-phases %standard-phases - (add-before 'check 'pre-check - (lambda* (#:key inputs outputs #:allow-other-keys) - ;; The data files are referenced by the tests but they are not - ;; installed. - (copy-recursively "plotnine/data" - (string-append (site-packages inputs - outputs) - "/plotnine/data")) - ;; Matplotlib needs to be able to write its configuration file - ;; somewhere. - (setenv "MPLCONFIGDIR" "/tmp") - (setenv "TZ" "UTC") - (setenv "TZDIR" - (search-input-directory inputs "share/zoneinfo"))))))) + ;; See https://github.com/has2k1/plotnine/issues/627 + `(list ,@(map (lambda (file) (string-append "--ignore=" file)) + (list "tests/test_aes.py" + "tests/test_annotation_logticks.py" + "tests/test_coords.py" + "tests/test_facet_labelling.py" + "tests/test_facets.py" + "tests/test_geom_bar_col_histogram.py" + "tests/test_geom_bin_2d.py" + "tests/test_geom_boxplot.py" + "tests/test_geom_count.py" + "tests/test_geom_density_2d.py" + "tests/test_geom_density.py" + "tests/test_geom_dotplot.py" + "tests/test_geom_freqpoly.py" + "tests/test_geom_map.py" + "tests/test_geom_path_line_step.py" + "tests/test_geom_point.py" + "tests/test_geom_raster.py" + "tests/test_geom_rect_tile.py" + "tests/test_geom_ribbon_area.py" + "tests/test_geom_sina.py" + "tests/test_geom_smooth.py" + "tests/test_geom_text_label.py" + "tests/test_geom_violin.py" + "tests/test_layout.py" + "tests/test_position.py" + "tests/test_qplot.py" + "tests/test_scale_internals.py" + "tests/test_scale_labelling.py" + "tests/test_stat_ecdf.py" + "tests/test_stat_function.py" + "tests/test_stat_summary.py" + "tests/test_theme.py")) + "-k" + (string-append "not " + (string-join + (list + ;; This triggers an unexpected but harmless + ;; warning. + "test_save_method" + ;; This test fails to set the locale. + "test_no_after_scale_warning" + ;; Missing optional modules + "test_non_linear_smooth" + "test_non_linear_smooth_no_ci") + " and not " + 'infix))) + #:phases + #~(modify-phases %standard-phases + (add-before 'build 'pretend-version + ;; The version string is usually derived via setuptools-scm, but + ;; without the git metadata available, the version string is set to + ;; '999'. + (lambda _ + (setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version))) + (add-before 'check 'pre-check + (lambda* (#:key inputs outputs #:allow-other-keys) + ;; The data files are referenced by the tests but they are not + ;; installed. + (copy-recursively "plotnine/data" + (string-append (site-packages inputs + outputs) + "/plotnine/data")) + (setenv "CI" "1") ;skip tests that are known to fail on CI. + ;; Matplotlib needs to be able to write its configuration file + ;; somewhere. + (setenv "MPLCONFIGDIR" "/tmp") + (setenv "TZ" "UTC") + (setenv "TZDIR" + (search-input-directory inputs "share/zoneinfo"))))))) (propagated-inputs (list python-adjusttext python-matplotlib python-mizani |