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Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index e10def76b0..1686ecb95e 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -10522,6 +10522,40 @@ function for pretty-printing multiple sequence alignments using the LaTeX package TeXshade.") (license license:gpl2+))) +(define-public r-msbackendsql + (package + (name "r-msbackendsql") + (version "1.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "MsBackendSql" version)) + (sha256 + (base32 "0hs4nh3bij5jzscdjjfkq2agcpysyy7ziv40713z7p7ai6wkppyj")))) + (properties `((upstream-name . "MsBackendSql"))) + (build-system r-build-system) + (propagated-inputs (list r-biocgenerics + r-biocparallel + r-data-table + r-dbi + r-iranges + r-mscoreutils + r-progress + r-protgenerics + r-s4vectors + r-spectra)) + (native-inputs (list r-knitr r-msdata r-mzr r-rsqlite r-testthat)) + (home-page "https://github.com/RforMassSpectrometry/MsBackendSql") + (synopsis "SQL-based mass spectrometry data backend") + (description + "This package provides an SQL-based mass spectrometry (MS) data backend +supporting also storage and handling of very large data sets. Objects from +this package are supposed to be used with the Spectra Bioconductor package. +Through the @code{MsBackendSql} with its minimal memory footprint, this +package thus provides an alternative MS data representation for very large or +remote MS data sets.") + (license license:artistic2.0))) + (define-public r-msnbase (package (name "r-msnbase") |