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2025-02-10gnu: python-dogpile-cache: Update to 1.3.4.Sharlatan Hellseher
* gnu/packages/databases.scm (python-dogpile-cache): Update to 1.3.4. [build-system]: Swap to pyproject-build-system. [propagated-inputs]: Add python-typing-extensions. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: I782c7697b845c6fb446e49aafb52d34ca824bf0c
2025-02-10gnu: python-dogpile.cache: Rename variable.Sharlatan Hellseher
* gnu/packages/databases.scm: (python-dogpile.cache): Rename variable to python-dogpile-cache. * gnu/packages/openstack.scm (python-openstacksdk) [propagated-inputs]: Replace python-dogpile.cache with python-dogpile-cache. Change-Id: I015c9ec38c14f9899caba05e86ff3f1a03b5c4d5
2025-01-26Merge remote-tracking branch 'origin/go-team'Sharlatan Hellseher
Change-Id: I3672a7dc248a41b1a83e4c488523f62cf1806710
2025-01-25gnu: python-sqlite-utils: Update to 3.38.Felix Gruber
* gnu/packages/databases.scm (python-sqlite-utils): Update to 3.38. Change-Id: I16347a6b1cb6326d5aaad03a72c3d626477f9280 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-01-22gnu: go-github-com-couchbase-gomemcached: Move to golang-xyz.Sharlatan Hellseher
* gnu/packages/databases.scm (go-github-com-couchbase-gomemcached): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: I62b77bffa9f6e673ebcedc58599c7e2a0e827f4c
2025-01-22gnu: go-github-com-couchbase-gomemcached: Update to 0.3.2.Sharlatan Hellseher
* gnu/packages/databases.scm (go-github-com-couchbase-gomemcached): Update to 0.3.2. [arguments] <test-flags>: Skip one tests. <test-subdirs>: Limit to project root, some submodule requires BSL licensed dependencies. [propagated-inputs]: Add go-github-com-pkg-errors. Change-Id: I661df8055f678f9f05add9785ab827ae11bd1b9e
2025-01-21gnu: go-github-com-gomodule-redigo: Move to golang-xyz.Sharlatan Hellseher
* gnu/packages/databases.scm (go-github-com-gomodule-redigo): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: I747da14647b1b32756b9f6a4dd0f840e908fcede
2025-01-21gnu: go-github-com-gomodule-redigo: Update to 1.9.2.Sharlatan Hellseher
* gnu/packages/databases.scm (go-github-com-gomodule-redigo): Update to 1.9.2. [arguments] <skip-build?>: No go files in project's root. <import-path>: Set to project's root. <unpack-path>: Remove as redundant. <test-flags>: Skip all tests requiring redis CLI and running redis service. <phases>: Add 'remove-examples. [native-inputs]: Remove redis. Change-Id: Ia87d118ddebc712d7c91d83c3bb707271c86ec16
2025-01-21gnu: go-github-com-bradfitz-gomemcache: Move to golang-xyz.Sharlatan Hellseher
* gnu/packages/databases.scm (go-github-com-bradfitz-gomemcache): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: I0592af69046c5b9aa85f6a3ec0efc56ffe5f1004
2025-01-21gnu: go-github-com-bradfitz-gomemcache: Update to ↵Sharlatan Hellseher
0.0.0-20230905024940-24af94b03874. * gnu/packages/databases.scm (go-github-com-bradfitz-gomemcache): Update to 0.0.0-20230905024940-24af94b03874. [source] <snippet>: Remove it as issue is resolved upstream. [arguments] <skip-build?>: No go files in project's root. <import-path>: Set to project's root. <unpack-path>: Remove as redundant. Change-Id: I64e002e6e76900f9299839e92fde2c22d3963368
2025-01-21gnu: Remove go-gopkg-in-mgo-v2.Sharlatan Hellseher
Not in use by any other packages in Guix. Unmaintained according to project's about, see <https://github.com/go-mgo/mgo/pull/574>. * gnu/packages/databases.scm (go-gopkg-in-mgo-v2): Delete variable. Change-Id: Idc1e064e20a3263fc62f478bf4fe69b7b39a4dcb
2025-01-21gnu: sqls: Fix build.Sharlatan Hellseher
* gnu/packages/databases.scm (sqls): [arguments] <test-subdirs>: Exclude "internal/handler" which requires database connection. Change-Id: I470981f040d2a0dc08d91f1239bbb0eb5ee98b0f
2025-01-20gnu: python-psycopg: Update to 3.2.4.Ricardo Wurmus
* gnu/packages/databases.scm (python-psycopg): Update to 3.2.4. [build-system]: Use pyproject-build-system. [arguments]: Simplify phases; restore 'sanity-check. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: Iec2949c7e01e0dff2893181c3a49e8e3a3319446
2025-01-20gnu: python-alembic: Use python-sqlalchemy-2.宋文武
* gnu/packages/databases.scm (python-alembic)[propagated-inputs]: Replace python-sqlalchemy with python-sqlalchemy-2. Change-Id: I49ad961eac3bcba5eaee05083e5299f17a8fae33
2025-01-20gnu: python-hiredis: Update to 3.1.0.Ricardo Wurmus
* gnu/packages/patches/python-hiredis-fix-header.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove patch. * gnu/packages/databases.scm (python-hiredis): Update to 3.1.0. [source]: Remove patch. [arguments]: Remove. Change-Id: I095c89329e4c42316398c7fccc86e1dee0affaea
2025-01-20gnu: Remove python-pyodbc-c.宋文武
Last updated 7 years ago, doesn't work with current python, with error: undefined symbol: PyUnicode_GetMax * gnu/packages/databases.scm (python-pyodbc-c): Remove variable. Change-Id: If51b6589c33129c7097e3219a4c96cb8d95a0edf
2025-01-20gnu: datasette: Update to 1.0a16.Ricardo Wurmus
* gnu/packages/databases.scm (datasette): Update to 1.0a16. [arguments]: Enable almost all tests; remove phase 'relax-requirements. [native-inputs]: Add nss-certs-for-test. Change-Id: I0b23df8e3d2fadb007f1da21ee9a727228bde43c
2025-01-20gnu: python-pypika-tortoise: Add missing input.Ricardo Wurmus
* gnu/packages/databases.scm (python-pypika-tortoise)[native-inputs]: Add python-setuptools. Change-Id: Ibe96738292a0948cae2add596fe76ee349c9dfeb
2025-01-16gnu: python-pylibmc: Fix description.gemmaro
* gnu/packages/databases.scm (python-pylibmc)[description]: Fix Texinfo code markup. Change-Id: I71cff32e5c2c739de26e0473d57f7fc13e669426 Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-12-22gnu: Add missing import.Zheng Junjie
This is a followup to 696d949dccf66cbe953eebf329553e4d26ea7f0a. Change-Id: I27ab43de95f976fc255a3dc9f1b85e906b869e52
2024-12-22gnu: Add perl-test-postgresql.Antero Mejr
* gnu/packages/databases.scm (perl-test-postgresql): New variable. Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2024-12-22gnu: Add perl-sql-translator.Antero Mejr
* gnu/packages/databases.scm (perl-sql-translator): New variable. Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2024-12-22gnu: Add perl-dbix-class-timestamp.Antero Mejr
* gnu/packages/databases.scm (perl-dbix-class-timestamp): New variable. Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2024-12-22gnu: Add perl-dbix-class-dynamicdefault.Antero Mejr
* gnu/packages/databases.scm (perl-dbix-class-dynamicdefault): New variable. Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2024-12-22gnu: Add perl-dbicx-testdatabase.Antero Mejr
* gnu/packages/databases.scm (perl-dbicx-testdatabase): New variable. Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2024-12-22gnu: Add perl-dbix-simple.Antero Mejr
* gnu/packages/databases.scm (perl-dbix-simple): New variable. Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2024-12-22gnu: Add perl-dbix-class-deploymenthandler.Antero Mejr
* gnu/packages/databases.scm (perl-dbix-class-deploymenthandler): New variable. Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2024-12-16gnu: python-adbc-driver-manager: Fix buld.Sharlatan Hellseher
* gnu/packages/databases.scm (python-adbc-driver-manager): [native-inputs]: Remove python-pytest; add python-setuptools and python-wheel. Change-Id: Idda91f087d8169185a02a61ae6b69d5668ae88b3
2024-12-15gnu: python-sqlalchemy-2: Fix build.Ian Eure
* gnu/packages/databases.scm (python-sqlalchemy-2)[native-inputs]: Add python-wheel. Change-Id: Ie35026f3049f9103397979cc6d0b8b347584d92d
2024-12-13gnu: python-redis: Fix build.Sharlatan Hellseher
* gnu/packages/databases.scm (python-redis) [arguments]<test-flags>: Refactor with 'string-join' to simplify test skip procedure. <phases>: Remove 'relax-requirements. [native-inputs]: Add python-pytest-cov. Change-Id: I595dc2bfe856ebac834ac7a80ac3862126c6b284
2024-12-13gnu: python-alembic: Update to 1.14.0.Sharlatan Hellseher
* gnu/packages/databases.scm (python-alembic): Update to 1.14.0. [arguments]<test-flags>: Skip 4 tests requiring latest python-pytz. [propagated-inputs]: Add python-typing-extensions. [native-inputs]: Remove python-pytest-cov; add python-pytest, python-setuptools, and python-wheel. Change-Id: Ife6a19416839ad1f94e912f926871db362ab820c
2024-12-13gnu: python-redis: Fix build.Sharlatan Hellseher
* gnu/packages/databases.scm (python-redis) [arguments]<test-flags>: Exclude one failing test. [native-inputs]: Remove python-pytest-asyncio; add python-pytest-asyncio-0.23. Change-Id: I3660d61dfb6bad8311824c85a2ce7b28facd580b
2024-12-13gnu: python-pickleshare: Improve package style.Sharlatan Hellseher
* gnu/packages/databases.scm (python-pickleshare) [build-system]: Swap to pyproject-build-system. [arguments]<phases>: Use default 'check phase. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: Ib53f1d3232112cff000e7413446f42085e945ee9
2024-12-13gnu: python-pymysql: Adjust inputs.Sharlatan Hellseher
* gnu/packages/databases.scm (python-pymysql) [native-inputs]: Add python-setuptools and python-wheel. Change-Id: I56bdbb7f182308fc63a85f3f1868bc245597725d
2024-12-13gnu: build-system/pyproject: Add missing native-inputs.Nicolas Graves
* gnu/packages/bioinformatics.scm (python-ega-download-client) [native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/databases.scm (datasette)[native-inputs]: Add python-pip. * gnu/packages/django.scm (python-django-localflavor, python-django-contact-form)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/graphviz.scm (python-uqbar)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/jupyter.scm (python-jupyterlab-server)[native-inputs]: Add python-wheel. (python-nbstripout)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/machine-learning.scm (python-captum, python-linear-operator, python-gpytorch)[native-inputs]: Add python-setuptools. * gnu/packages/music.scm (abjad, abjad-ext-rmarkers, abjed-ext-nauert, python-mutagen)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/package-management.scm (python-conda-package-handling)[native-inputs]: Add python-setuptools and python-wheel. (conda)[native-inputs]: Add python-wheel. * gnu/packages/python-check.scm (python-pyinstrument, python-pytest-testmon, python-pytest-trio, python-nbval, python-pytest-toolbox)[native-inputs]: Add python-setuptools and python-wheel. (python-nptyping)[native-inputs]: Add python-setuptools. * gnu/packages/python-check.scm (python-dask-expr)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/python-web.scm (parfive, python-aioftp, python-hupper, python-sanic, python-mechanicalsoup, python-tinycss, python-aiostream, python-cbor2, gunicorn)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/python-xyz.scm (python-apprise, python-jaraco-classes, python-sparse, python-shtab, python-pyan3)[native-inputs]: Add python-setuptools. (python-jupytext, python-orderedmultidict, python-identify, python-nodeenv, python-cfgv, python-zarr, python-multipart, python-nbconvert, python-cram, python-immutables, python-numpydoc, python-cairosvg, python-unidecode, python-black, python-multidict, python-mpv-jsonipc, python-humanize, python-cmd2)[native-inputs]: Add python-setuptools and python-wheel. (python-partd, python-dask, python-zarr)[native-inputs]: Add python-wheel. (python-nbconvert)[propagated-inputs]: Add texlive-etoolbox. Remove duplicate textlive-jknapltx. (python-isort)[native-inputs]: Add python-pip. * gnu/packages/simulation.scm (python-fenics-dijitso)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/sphinx.scm (python-pydata-sphinx-theme, python-sphinx-autodoc-typehints)[native-inputs]: Add python-setuptools. * gnu/packages/syndication.scm (tuir)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/terminals.scm (python-halo)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/time.scm (python-arrow, python-dateutil) [native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/version-control.scm (pre-commit)[native-inputs]: Add python-setuptools and python-wheel. Remove input labels. * gnu/packages/virtualization.scm (python-qemu-qmp, python-transient)[native-inputs]: Add python-setuptools and python-wheel. * gnu/packages/xorg.scm (python-xcffib)[native-inputs]: Add python-setuptools and python-wheel. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Change-Id: Id61cf8cdc47bd4c2871c0a9c8e9a5bfd51157df0
2024-12-13gnu: python-alembic: Move to pyproject-build-system.Nicolas Graves
* gnu/packages/databases.scm (python-alembic): [build-system]: Move to pyproject-build-system. [arguments]: Remove field, now uneeded. Change-Id: I5907ff84412d867d094aae5fb4daa8481eb7f30c Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2024-12-13gnu: python-mysqlclient: Add missing inputs.Ricardo Wurmus
* gnu/packages/databases.scm (python-mysqlclient)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: Id0343382f1ef80b0299641e2b588e1687beeab30
2024-12-13gnu: Add python-setuptools/python-wheel where necessary.Lars-Dominik Braun
Changes to pyproject-build-system require explicit dependency on setuptools/wheel. Change-Id: Icd7699fc1dc56e974ae7568f2ae916dbf876bea5
2024-12-13build-system/pyproject: Use python-sans-pip-wrapper as default-python.Lars-Dominik Braun
Also adds python-setuptools and python-wheel to relevant packages, either to native-inputs or to propagated inputs if the pkg_resources Python module is loaded at runtime. * guix/build-system/pyproject.scm (default-python): Default to python-sans-pip-wrapper. Change-Id: I2d986c2225114f54459dd6bb360913106e52cdf4
2024-12-09gnu: duckdb: Build with for core extensions.Ekaitz Zarraga
DuckDB comes with a set of built-in extensions. This commit enables those that don't require extra dependencies. * gnu/packages/databases.scm (duckdb)[arguments]<#:configure-flags>: Add BUILD_EXTENSIONS with autocomplete, fts, icu, json, parquet and tpch. Change-Id: Ibac5efaeec04dcba98af1c497e75632166941fc2
2024-12-03gnu: python-fakeredis: Update to 2.26.1.Ricardo Wurmus
* gnu/packages/databases.scm (python-fakeredis): Update to 2.26.1. [arguments]: Do not run slow tests; add phases 'poetry-compatibility and 'start-redis. [propagated-inputs]: Add python-typing-extensions. [native-inputs]: Add redis. Change-Id: I18ed122d9e5307d3d723cfc9ef0d51f120b4ccb5 Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-12-03gnu: python-redis: Update to 5.2.0.Ricardo Wurmus
* gnu/packages/databases.scm (python-redis): Update to 5.2.0. [arguments]: Update list of tests to skip; add phase 'relax-requirements. [native-inputs]: Add python-numpy. Change-Id: I789c511fb4a516e6cdad06dba695af9bb89f562d Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-12-02gnu: redis: Add comment about upcoming license change.Efraim Flashner
* gnu/packages/databases.scm (redis): Add a note with the package to be aware of the upcoming non-free license change. Change-Id: I60ef9bce81b6650d88f567e98c5bcf543a13082e
2024-12-02gnu: redis: Update to 7.2.6.Hilton Chain
* gnu/packages/databases.scm (redis): Update to 7.2.6. [arguments]<#:phases>: Update failing tests. Change-Id: Ife107541697fda4f0928497560871f8ffb07d445
2024-11-23gnu: Respect --cores build argument in some python packages.Sharlatan Hellseher
Reported by Greg Hogan <code@greghogan.com> in #74445. * gnu/packages/astronomy.scm (python-asdf-astropy, python-astropy, python-photutils, python-poppy, python-regions, python-reproject, python-sunpy, python-spectral-cube, python-stdatamodels, python-pysiaf, python-sbpy, python-asdf-coordinates-schemas, python-roman-datamodels, python-webbpsf, python-yt): [arguments]<test-flags>: Adjust "-n" or "--numprocess" to respect "--cores" build argument. * gnu/packages/check.scm (python-crosshair): Likewise. * gnu/packages/databases.scm (python-fastparquet, python-pycurl, awscli, python-s3transfer): Likewise. * gnu/packages/python-xyz.scm (python-glymur, python-zarr, python-dask): Likewise. Change-Id: Ifbc6435e4ad22b0ae822b485bccca41eaa165cc5
2024-11-14gnu: postgresql-10: Replace deprecated dependency.David Pflug
* gnu/packages/databases.scm (postgresql-10): Inherit postgresql-13 instead of 11. Using the deprecated postgresql-11 package was causing warnings to be printed on `guix pull`. Change-Id: I36225ff2a1889f94cd5aabe229ee638793594abf Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-11-12gnu: postgresql-15: Update to 16.4. [security fixes]Nicolas Graves
This fixes CVE-2024-7348. * /gnu/packages/databases.scm (postgresql-15): Move from here... (postgresql-16): ... to here. [version]: Update to 16.4. [source]: Adapt source and add patch. [native-inputs]: Add pkg-config. [inputs]: Add icu4c. * gnu/packages/patches/postgresql-disable-normalize_exec_path.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Change-Id: I57771ebcf462bdeca73eda157274db089816fd12
2024-11-12gnu: postgresql-14: Update to 14.13.Nicolas Graves
* gnu/packages/databases.scm (postgresql-14): Update to 14.13. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2024-11-12gnu: postgresql-13: Update to 13.16. [security fixes]Nicolas Graves
This fixes CVE-2024-7348. * gnu/packages/databases.scm (postgresql-13): Update to 13.16. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2024-10-28gnu: postgresql: Deprecate unsupported versions.Nicolas Graves
Versions 10 and 11 are unsupported according to https://www.postgresql.org/support/versioning/ postgresql-10 also has a CVE. * doc/guix.texi: Change default value of postgresql-service-type's postgresql field. * gnu/packages/databases.scm (postresql-10, postgresql-11): Use define-deprecated/public to warn users. * gnu/services/databases.scm (postgresql-configuration): Change the default value of postgresql-configuration-postgresql. * gnu/tests/guix.scm (%guix-data-service-os): Change the default value of postgresql. Signed-off-by: Andreas Enge <andreas@enge.fr> Change-Id: Ie8744c8e1f246e9b45ff5e29d4e98214de3ca66a
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