diff options
Diffstat (limited to 'gnu/packages/machine-learning.scm')
| -rw-r--r-- | gnu/packages/machine-learning.scm | 61 |
1 files changed, 42 insertions, 19 deletions
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index bcee6a6fc3..8bd1d8b8bb 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 Ricardo Wurmus <[email protected]> +;;; Copyright © 2015-2023 Ricardo Wurmus <[email protected]> ;;; Copyright © 2016, 2020, 2021, 2022 Efraim Flashner <[email protected]> ;;; Copyright © 2016, 2017, 2020 Marius Bakke <[email protected]> ;;; Copyright © 2016 Hartmut Goebel <[email protected]> @@ -15,7 +15,7 @@ ;;; Copyright © 2019 Brett Gilio <[email protected]> ;;; Copyright © 2020 Konrad Hinsen <[email protected]> ;;; Copyright © 2020 Edouard Klein <[email protected]> -;;; Copyright © 2020, 2021, 2022 Vinicius Monego <[email protected]> +;;; Copyright © 2020, 2021, 2022, 2023 Vinicius Monego <[email protected]> ;;; Copyright © 2020, 2021, 2022 Maxim Cournoyer <[email protected]> ;;; ;;; This file is part of GNU Guix. @@ -45,7 +45,6 @@ #:use-module (guix build-system ocaml) #:use-module (guix build-system pyproject) #:use-module (guix build-system python) - #:use-module (guix build-system r) #:use-module (guix build-system trivial) #:use-module (guix git-download) #:use-module (gnu packages) @@ -438,7 +437,7 @@ Performance is achieved by using the LLVM JIT compiler.") "CFLAGS=-fcommon"))) (inputs (list perl)) - (home-page "http://micans.org/mcl/") + (home-page "https://micans.org/mcl/") (synopsis "Clustering algorithm for graphs") (description "The MCL algorithm is short for the @dfn{Markov Cluster Algorithm}, a @@ -565,7 +564,7 @@ sample proximities between pairs of cases.") "0hlbdmjjf1jgsvi3d2hwni5lz3l9a5bzj6ijpbawa8a7cbrpp66y")))) (build-system gnu-build-system) (arguments '(#:configure-flags '("--enable-ngram-fsts"))) - (home-page "http://www.openfst.org") + (home-page "https://www.openfst.org") (synopsis "Library for weighted finite-state transducers") (description "OpenFst is a library for constructing, combining, optimizing, and searching weighted finite-state transducers (FSTs).") @@ -906,7 +905,7 @@ with a single function call.") (invoke "ctest")))))) (native-inputs (list catch-framework)) - (home-page "http://reactivex.io/") + (home-page "https://reactivex.io/") (synopsis "Reactive Extensions for C++") (description "The Reactive Extensions for C++ (RxCpp) is a library of algorithms for @@ -1400,6 +1399,31 @@ data by providing clean labels during training.") (native-inputs (list python-pytest)))) +(define-public python-cma + (package + (name "python-cma") + (version "3.3.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "cma" version)) + (sha256 + (base32 + "1v31b2vnnr4v6ack7zfmw7zb47vbzjr9nyvx2lbfhyjf7zhbhj5p")))) + (build-system python-build-system) + (arguments + (list #:phases #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "python" "-m" "cma.test"))))))) + (propagated-inputs (list python-numpy)) + (home-page "https://github.com/CMA-ES/pycma") + (synopsis "Python implementation of CMA-ES") + (description "This package provides a Python implementation of the +@acronym{CMA-ES, Covariance Matrix Adaptation Evolution Strategy} algorithm +and a few related numerical optimization tools.") + (license license:bsd-3))) + (define-public python-cmaes (package (name "python-cmaes") @@ -3346,27 +3370,26 @@ Python.") (define-public python-hmmlearn (package (name "python-hmmlearn") - (version "0.2.7") + (version "0.2.8") (source (origin (method url-fetch) (uri (pypi-uri "hmmlearn" version)) (sha256 (base32 - "1qgnf1kdxicygy8nvpv866iqvwq0rc6xkd3s6slmvxvsy8h2fjvb")))) + "1yd5l9ra37mks41mn5bigav7xpb161a9yqlcnz4ir076vkik2sb9")))) (build-system python-build-system) (arguments - `(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda* (#:key inputs outputs tests? #:allow-other-keys) - (when tests? - (add-installed-pythonpath inputs outputs) - (with-directory-excursion (string-append (assoc-ref outputs "out") "/lib") - (invoke "python" "-m" "pytest")))))))) + (list + #:phases + #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (with-directory-excursion (string-append #$output "/lib") + (invoke "python" "-m" "pytest")))))))) (propagated-inputs (list pybind11 - python-cython python-numpy python-scikit-learn python-scipy @@ -3384,7 +3407,7 @@ of Hidden Markov Models.") (define-public liblantern (package (name "liblantern") - (version "0.9.0") + (version "0.9.1") (source (origin (method git-fetch) @@ -3393,7 +3416,7 @@ of Hidden Markov Models.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0bjd0ym547k46ci8xnwsry7x8w5k65cl86snlcrfn4vs3fald2y9")))) + (base32 "1rycs7fgm03fxp8lxj8ljrdwy5whxd4554xzklbcmn4mcwbxgg57")))) (build-system cmake-build-system) (arguments (list |