diff options
| author | nafkhamdc <[email protected]> | 2024-04-26 16:08:12 +0000 |
|---|---|---|
| committer | Ricardo Wurmus <[email protected]> | 2024-05-06 00:07:40 +0200 |
| commit | e33bf0bbe6ffc5fec83b12755f4ad7fdea857518 (patch) | |
| tree | 4f53bec2602c14f3a55a6a9bc4b88baa20af5255 /gnu | |
| parent | a710ebec1d70d78dd8b84689388a0b670aafa745 (diff) | |
gnu: Add python-pyahocorasick.
* gnu/packages/bioinformatics.scm (python-pyahocorasick): New variable.
Change-Id: I468bed450351b49cf81344a328841cd77f67cb4e
Signed-off-by: Ricardo Wurmus <[email protected]>
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 8452afaa8b..41e8f07603 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6490,6 +6490,29 @@ Illumina paired-end data (for CASAVA 1.8+).") average nucleotide identity.") (license license:expat))) +(define-public python-pyahocorasick + (package + (name "python-pyahocorasick") + (version "2.1.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/WojciechMula/pyahocorasick") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1fsnivwcw56q7lwz41c5kbfvxv0v17mmkx43i2a293l49fxj08j8")))) + (build-system pyproject-build-system) + (native-inputs (list python-pytest python-twine python-wheel)) + (home-page "https://github.com/WojciechMula/pyahocorasick") + (synopsis "Library for finding multiple key strings in text") + (description + "Pyahocorasick is a fast, memory-efficient library for multi-pattern string search. +This means that you can find multiple key strings occurrences +at once in some input text.") + (license license:bsd-3))) + (define-public exonerate (package (name "exonerate") |